Publications

Full List of publications

2024

Brain Structure Ages - A new biomarker for multi-disease classification
Huy-Dung Nguyen, Michaël Clément, Boris Mansencal, Pierrick Coupé
Human Brain Mapping, 2024, 45 (1), ⟨10.1002/hbm.26558⟩

2023

Deep grading for MRI-based differential diagnosis of Alzheimer’s disease and Frontotemporal dementia
Huy-Dung Nguyen, Michaël Clément, Vincent Planche, Boris Mansencal, Pierrick Coupé
Artificial Intelligence in Medicine, 2023, 144, pp.102636. ⟨10.1016/j.artmed.2023.102636⟩

Lifespan neurodegeneration of the human brain in multiple sclerosis
Pierrick Coupé, Vincent Planche, Boris Mansencal, Reda A Kamroui, Ismail Koubiyr, José V Manjòn, Thomas Tourdias
Human Brain Mapping, 2023, 44 (17), pp.5602-5611. ⟨10.1002/hbm.26464⟩

Integration of operator-validated contours in deformable image registration for dose accumulation in radiotherapy
Lando Bosma, Mario Ries, Baudouin Denis de Senneville, Bas Raaymakers, Cornel Zachiu
Physics and Imaging in Radiation Oncology, 2023, 27, pp.100483. ⟨10.1016/j.phro.2023.100483⟩

Generating high-resolution synthetic CT from lung MRI with ultrashort echo-times: initial evaluation in cystic fibrosis
Arthur Longuefosse, Julien Raoult, Ilyes Benlala, Baudouin Denis de Senneville, Thomas Benkert, Julie Macey, Stéphanie Bui, Patrick Berger, Gilbert Ferretti, Jean-Yves Gaubert, Renan Liberge, Antoine Hutt, Baptiste Morel, François Laurent, Fabien Baldacci, Gaël Dournes
Radiology, 2023, 308 (1), ⟨10.1148/radiol.230052⟩

Non-Contrast-Enhanced Functional Lung MRI to Evaluate Treatment Response of Allergic Bronchopulmonary Aspergillosis in Patients With Cystic Fibrosis: A Pilot Study
Ilyes Benlala, Rabea Klaar, Thomas Gaass, Julie Macey, Stéphanie Bui, Baudouin Denis de Senneville, Patrick Berger, François Laurent, Gael Dournes, Julien Dinkel
Journal of Magnetic Resonance Imaging, In press, ⟨10.1002/jmri.28844⟩

Understanding the relationship between cerebellar structure and social abilities
Yannis Elandaloussi, Dorothea L Floris, Pierrick Coupé, Edouard Duchesnay, Angeline Mihailov, Antoine Grigis, Indrit Bègue, Julie Victor, Vincent Frouin, Marion Leboyer, Josselin Houenou, Charles Laidi
Molecular Autism, 2023, 14 (1), pp.18. ⟨10.1186/s13229-023-00551-8⟩

3D motion strategy for online volumetric thermometry using simultaneous multi-slice EPI at 1.5T: an evaluation study
Valéry Ozenne, Pierre Bour, Baudouin Denis de Senneville, Bruno Quesson
International Journal of Hyperthermia, 2023, 40 (1), ⟨10.1080/02656736.2023.2194595⟩

Midbrain structure volume, estimated myelin and functional connectivity in idiopathic generalised epilepsy
Andrea Mckavanagh, Adam Ridzuan-Allen, Barbara A.K. Kreilkamp, Yachin Chen, José V Manjón, Pierrick Coupé, Martyn Bracewell, Kumar Das, Peter N Taylor, Anthony G Marson, Simon S Keller
Epilepsy & Behavior, 2023, 140, pp.109084. ⟨10.1016/j.yebeh.2023.109084⟩

Technical Note: Intensity-based quality assurance criteria for deformable image registration in image-guided radiotherapy
Lando Bosma, Cornel Zachiu, Baudouin Denis de Senneville, Bas Raaymakers, Mario Ries
Medical Physics, 2023, 50 (9), pp.5715-5722. ⟨10.1002/mp.16367⟩

Towards better Interpretable and Generalizable AD detection using Collective Artificial Intelligence
Huy-Dung Nguyen, Michaël Clément, Boris Mansencal, Pierrick Coupé
Computerized Medical Imaging and Graphics, 2023, 104, ⟨10.1016/j.compmedimag.2022.102171⟩

Anatomical MRI staging of frontotemporal dementia variants
Vincent Planche, Boris Mansencal, Jose V Manjon, Thomas Tourdias, Gwenaëlle Catheline, Pierrick Coupé
Alzheimer’s & Dementia : the Journal of the Alzheimer’s Association, 2023, 19 (8), pp.3283-3294. ⟨10.1002/alz.12975⟩

Preserved Navigation abilities and Spatio-Temporal Memory in individuals with Autism Spectrum Disorder
Charles Laidi, Nathan Neu, Aurélie Watilliaux, Axelle Martinez-Teruel, Mihoby Razafinimanana, Jennifer Boisgontier, Sevan Hotier, Marc‐antoine d’Albis, Richard Delorme, Anouck Amestoy, Štefan Holiga, Myriam Ly‐le Moal, Pierrick Coupé, Marion Leboyer, Josselin Houenou, Laure Rondi-Reig, Anne‐lise Paradis
Autism Research, 2023, 16 (2), pp.280-293. ⟨10.1002/aur.2865⟩

3D Transformer based on deformable patch location for differential diagnosis between Alzheimer’s disease and Frontotemporal dementia
Huy-Dung Nguyen, Michaël Clément, Boris Mansencal, Pierrick Coupé
14th International Workshop, MLMI 2023, Held in Conjunction with MICCAI 2023, Oct 2023, Vancouver, Canada. pp.53-63, ⟨10.1007/978-3-031-45676-3_6⟩

Lung CT Synthesis Using GANs with Conditional Normalization on Registered Ultrashort Echo-Time MRI
Arthur Longuefosse, Gaël Dournes, Ilyes Benlala, Baudouin Denis de Senneville, François Laurent, Pascal Desbarats, Fabien Baldacci
ISBI 2023 - 20th IEEE International Symposium on Biomedical Imaging, Apr 2023, Cartagena de Indias, Colombia. pp.1-5, ⟨10.1109/ISBI53787.2023.10230331⟩

MR to CT synthesis using GANs : a practical guide applied to thoracic imaging
Arthur Longuefosse, Baudouin Denis de Senneville, Gaël Dournes, Ilyes Benlala, François Laurent, Pascal Desbarats, Fabien Baldacci
VISIGRAPP 2023 - International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications, Feb 2023, Lisbon, Portugal. pp.268-274, ⟨10.5220/0011895700003417⟩

2022

Endoscopic in-situ recognition of urinary stones during LASER-induced stone fragmentation: a modern, effective and essential approach in the diagnostic process in urolithiasis
Vincent Estrade, Baudouin Denis de Senneville, Laurent Facq, Michel Daudon
Comptes Rendus. Chimie, 2022, 25 (S1), pp.407-416. ⟨10.5802/crchim.162⟩

Longitudinal detection of new MS lesions using deep learning
Reda Abdellah Kamraoui, Boris Mansencal, José V. Manjón, Pierrick Coupé
Frontiers in Neuroimaging, 2022, ⟨10.3389/fnimg.2022.948235⟩

Deep morphological recognition of kidney stones using intra-operative endoscopic digital videos
Vincent Estrade, Michel Daudon, Emmanuel Richard, Jean-Christophe Bernhard, Franck Bladou, Gregoire Robert, Laurent Facq, Baudouin Denis de Senneville
Physics in Medicine and Biology, 2022, 67 (16), pp.165006. ⟨10.1088/1361-6560/ac8592⟩

HAVAs : Alzheimer disease detection using normative and pathological lifespan models
Pierrick Coupé, José V. Manjón, Boris Mansencal, Thomas Tourdias, Gwénaëlle Catheline, Vincent Planche
Human Brain Mapping, 2022, ⟨10.1002/hbm.25850⟩

Structural progression of Alzheimer’s disease over decades: the MRI staging scheme
Vincent Planche, José Manjon, Boris Mansencal, Enrique Lanuza, Thomas Tourdias, Gwenaëlle Catheline, Pierrick Coupé
Brain Communications, 2022, 4 (3), ⟨10.1093/braincomms/fcac109⟩

Microstructural Gray Matter Integrity Deteriorates After an Ischemic Stroke and Is Associated with Processing Speed
Sharmila Sagnier, Gwenaëlle Catheline, Bixente Dilharreguy, Pierre-Antoine Linck, Pierrick Coupé, Fanny Munsch, Antoine Bigourdan, Mathilde Poli, Sabrina Debruxelles, Pauline Renou, Stéphane Olindo, François Rouanet, Vincent Dousset, Thomas Tourdias, Igor Sibon
Translational stroke research, 2022, ⟨10.1007/s12975-022-01020-9⟩

Normal-Appearing White Matter Deteriorates over the Year After an Ischemic Stroke and Is Associated with Global Cognition
Sharmila Sagnier, Gwenaëlle Catheline, Bixente Dilharreguy, Pierre-Antoine Linck, Pierrick Coupé, Fanny Munsch, Antoine Bigourdan, Mathilde Poli, Sabrina Debruxelles, Pauline Renou, Stéphane Olindo, François Rouanet, Vincent Dousset, Thomas Tourdias, Igor Sibon
Translational stroke research./Transl Stroke Res, 2022, ⟨10.1007/s12975-022-00988-8⟩

Towards automatic recognition of pure and mixed stones using intra‐operative endoscopic digital images
Vincent Estrade, Michel Daudon, Emmanuel Richard, Jean‐christophe Bernhard, Franck Bladou, Grégoire Robert, Baudouin Denis de Senneville
BJU International, 2022, 129 (2), pp.234-242. ⟨10.1111/bju.15515⟩

Deep Learning for the Automatic Quantification of Pleural Plaques in Asbestos-Exposed Subjects
Ilyes Benlala, Baudouin Denis de Senneville, Gael Dournes, Morgane Menant, Celine Gramond, Isabelle Thaon, Benedicte Clin, Patrick Brochard, Antoine Gislard, Pascal Andujar, Soizick Chammings, Justine Gallet, Aude Lacourt, Fleur Delva, Christophe Paris, Gilbert Ferretti, Jean-Claude Pairon, Francois Laurent
International Journal of Environmental Research and Public Health, 2022, 19 (3), ⟨10.3390/ijerph19031417⟩

Cerebellar atypicalities in autism?
Charles Laidi, Dorothea L Floris, Julian Tillmann, Yannis Elandaloussi, Mariam Zabihi, Tony Charman, Thomas Wolfers, Sarah Durston, Caroline Moessnang, Flavio Dell’acqua, Christine Ecker, Eva Loth, Declan Murphy, Simon Baron-Cohen, Jan K Buitelaar, Andre F Marquand, Christian F Beckmann, Vincent Frouin, Marion Leboyer, Edouard Duchesnay, Pierrick Coupé, Josselin Houenou
Biological Psychiatry, In press, ⟨10.1016/j.biopsych.2022.05.020⟩

Artificial intelligence in CT for quantifying lung changes in the era of CFTR modulators
Gael Dournes, Chase S Hall, Matthew M Willmering, Alan S Brody, Julie Macey, Stephanie Bui, Baudouin Denis de Senneville, Patrick Berger, François Laurent, Ilyes Benlala, Jason Woods
European Respiratory Journal, 2022, 59, pp.2100844. ⟨10.1183/13993003.00844-2021⟩

DeepLesionBrain: Towards a broader deep-learning generalization for multiple sclerosis lesion segmentation
Reda Abdellah Kamraoui, Vinh-Thong Ta, Thomas Tourdias, Boris Mansencal, José Manjon, Pierrick Coupé
Medical Image Analysis, 2022, 76, pp.102312. ⟨10.1016/j.media.2021.102312⟩

Deep Anomaly Generation: An Image Translation Approach of Synthesizing Abnormal Banded Chromosome Images
Lukas Uzolas, Javier Rico, Pierrick Coupé, Juan C Sanmiguel, György Cserey
IEEE Access, 2022, 10, pp.59090-59098. ⟨10.1109/ACCESS.2022.3178786⟩

vol2Brain: A new online Pipeline for whole Brain MRI analysis
José V Manjón, José Romero, Roberto Vivo-Hernando, Gregorio Rubio, Fernando Aparici, Mariam de la Iglesia-Vaya, Pierrick Coupé
Frontiers in Neuroinformatics, 2022, 16, pp.862865. ⟨10.3389/fninf.2022.862805⟩

Structural connectivity mapping in human hippocampal-subfields using super-resolution hybrid diffusion imaging: a feasibility study
Nahla Elsaid, Pierrick Coupé, Andrew Saykin, Yu-Chien Wu
Neuroradiology, In press, ⟨10.1007/s00234-022-02968-z⟩

A novel deep learning based hippocampus subfield segmentation method
José V Manjón, José E Romero, Pierrick Coupe
Scientific Reports, 2022, 12 (1), pp.1333. ⟨10.1038/s41598-022-05287-8⟩

Interpretable differential diagnosis for Alzheimer’s disease and Frontotemporal dementia
Huy-Dung Nguyen, Michaël Clément, Boris Mansencal, Pierrick Coupé
International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2022, Resorts World Convention Centre, Singapore. ⟨10.1007/978-3-031-16431-6_6⟩

Automated needle localisation for electric field computation during an electroporation ablation
Eloïse Inacio, Luc Lafitte, Olivier Sutter, Olivier Seror, Baudouin Denis de Senneville, Clair Poignard
IEEE - MELECON 2022 - 21st Mediterranean Electrotechnical Conference, Jun 2022, Palerme, Italy. ⟨10.1109/MELECON53508.2022.9842866⟩

2021

Deep Learning based MRI contrast synthesis using full volume prediction
Jose V Manjon, Jose E Romero, Pierrick Coupé
Biomedical Physics & Engineering Express, 2021, ⟨10.1088/2057-1976/ac3c64⟩

Voluntary Wheel Running Does Not Enhance Radiotherapy Efficiency in a Preclinical Model of Prostate Cancer: The Importance of Physical Activity Modalities?
Suzanne Dufresne, Cindy Richard, Arthur Dieumegard, Luz Orfila, Gregory Delpon, Sophie Chiavassa, Brice Martin, Laurent Rouvière, Jean-Michel Escoffre, Edward Oujagir, Baudouin Denis de Senneville, Ayache Bouakaz, Nathalie Rioux-Leclercq, Vincent Potiron, Amélie Rébillard
Cancers, 2021, 13 (21), pp.5402. ⟨10.3390/cancers13215402⟩

Improved 18-FDG PET/CT diagnosis of multiple myeloma diffuse disease by radiomics analysis
Charles Mesguich, Elif Hindie, Baudouin Denis de Senneville, Ghoufrane Tlili, Jean-Baptiste Pinaquy, Gerald Marit, Olivier Saut
Nuclear Medicine Communications, 2021, 42 (10), pp.1135-1143. ⟨10.1097/MNM.0000000000001437⟩

Quantitative investigation of dose accumulation errors from intra-fraction motion in MRgRT for prostate cancer
Lando Bosma, Cornel Zachiu, Mario Ries, Baudouin Denis de Senneville, Bas Raaymakers
Physics in Medicine and Biology, 2021, 66 (6), pp.065002. ⟨10.1088/1361-6560/abe02a⟩

Cerebral blood flow and cerebrovascular reactivity are preserved in a mouse model of cerebral microvascular amyloidosis
Leon P Munting, Marc Pp Derieppe, Ernst Suidgeest, Lydiane Hirschler, Matthias Jp van Osch, Baudouin Denis de Senneville, Louise van Der Weerd
eLife, 2021, 10, ⟨10.7554/eLife.61279⟩

Deep correction of breathing-related artifacts in real-time MR-thermometry
Baudouin Denis de Senneville, Pierrick Coupé, Mario Ries, Laurent Facq, Chrit Moonen
Computerized Medical Imaging and Graphics, 2021, pp.101834. ⟨10.1016/j.compmedimag.2020.101834⟩

Towards a unified analysis of cerebellum maturation and aging across the entire lifespan: A MRI analysis
José E Romero, Pierrick Coupé, Enrique Lanuza, Gwenaelle Catheline, José V Manjón
Human Brain Mapping, 2021, 42 (5), pp.1287-1303. ⟨10.1002/hbm.25293⟩

Toward improved endoscopic examination of urinary stones: a concordance study between endoscopic digital pictures vs. Microscopy
Vincent Estrade, Baudouin Denis de Senneville, Paul Meria, Christophe Almeras, Franck Bladou, Jean-Christophe Bernhard, Gregoire Robert, Olivier Traxer, Michel Daudon
BJU International, 2021, 128 (3), pp.319-330. ⟨10.1111/bju.15312⟩

Deep Grading based on Collective Artificial Intelligence for AD Diagnosis and Prognosis
Huy-Dung Nguyen, Michaël Clément, Boris Mansencal, Pierrick Coupé
Workshop on Interpretability of Machine Intelligence in Medical Image Computing at MICCAI 2021, 2021, Strasbourg, France. ⟨10.1007/978-3-030-87444-5_3⟩

2020

Anatomically-adaptive multi-modal image registration for image-guided external-beam radiotherapy
C Zachiu, Baudouin Denis de Senneville, T Willigenburg, J Voort van Zyp, J C J de Boer, B W Raaymakers, M Ries
Physics in Medicine and Biology, 2020, 65 (21), pp.215028. ⟨10.1088/1361-6560/abad7d⟩

Multi-scale Graph-based Grading for Alzheimer’s Disease Prediction
Kilian Hett, Vinh-Thong Ta, Jose Vicente Manjon, Pierrick Coupé
Medical Image Analysis, In press

AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation
Pierrick Coupé, Boris Mansencal, Michaël Clément, Rémi Giraud, Baudouin Denis de Senneville, Vinh-Thong Ta, Vincent Lepetit, José V. Manjón
NeuroImage, 2020, 219, pp.117026. ⟨10.1016/j.neuroimage.2020.117026⟩

Editorial: Bubbles, Droplets and Micelles for Acoustically-Mediated Drug/Gene Delivery
Jean-Michel Escoffre, Baudouin Denis de Senneville, Noboru Sasaki, Marc Derieppe
Frontiers in Pharmacology, 2020, 11, pp.954. ⟨10.3389/fphar.2020.00954⟩

Accuracy of MRI Classification Algorithms in a Tertiary Memory Center Clinical Routine Cohort
Alexandre Morin, Jorge Samper-González, Anne Bertrand, Sebastian Ströer, Didier Dormont, Aline Mendes, Pierrick Coupé, Jamila Ahdidan, Marcel Lévy, Dalila Samri, Harald Hampel, Bruno Dubois, Marc Teichmann, Stéphane Epelbaum, Olivier Colliot
Journal of Alzheimer’s Disease, 2020, pp.1-10. ⟨10.3233/JAD-190594⟩

Numerical modelling challenges for clinical electroporation ablation technique of liver tumors
Olivier Gallinato, Baudouin Denis de Senneville, Olivier Seror, Clair Poignard
Mathematical Modelling of Natural Phenomena, 2020, 15, ⟨10.1051/mmnp/2019037⟩

Normal-Appearing White Matter Integrity Is a Predictor of Outcome After Ischemic Stroke
Sharmila Sagnier, Gwenaelle Catheline, Bixente Dilharreguy, Pierre-Antoine Linck, Pierrick Coupé, Fanny Munsch, Antoine Bigourdan, Sabrina Debruxelles, Mathilde Poli, Stéphane Olindo, Pauline Renou, François Rouanet, Vincent Dousset, Sylvie Berthoz, Thomas Tourdias, Igor Sibon
Stroke, 2020, 51 (2), pp.449-456. ⟨10.1161/STROKEAHA.119.026886⟩

Biomechanical quality assurance criteria for deformable image registration algorithms used in radiotherapy guidance
Cornel Zachiu, Baudouin Denis de Senneville, Bas W. Raaymakers, Mario Ries
Physics in Medicine and Biology, 2020, ⟨10.1088/1361-6560/ab501d⟩

Differential annualized rates of hippocampal subfields atrophy in aging and future Alzheimer’s clinical syndrome
Louis Nadal, Pierrick Coupé, Catherine Helmer, José V. Manjón, Hélène Amieva, François Tison, Jean-François Dartigues, Gwenaelle Catheline, Vincent Planche
Neurobiology of Aging, In press, ⟨10.1016/j.neurobiolaging.2020.01.011⟩

Patch-based field-of-view matching in multi-modal images for electroporation-based ablations
Luc Lafitte, Rémi Giraud, Cornel Zachiu, Mario Ries, Olivier Sutter, Antoine Petit, Olivier Seror, Clair Poignard, Baudouin Denis de Senneville
Computerized Medical Imaging and Graphics, 2020, 84, ⟨10.1016/j.compmedimag.2020.101750⟩

pBrain: A novel pipeline for Parkinson related brain structure segmentation
José V. Manjón, Alexa Bertó, José E. Romero, Enrique Lanuza, Roberto Vivo-Hernando, Fernando Aparici-Robles, Pierrick Coupé
Neuroimage-Clinical, 2020, 25, pp.102184. ⟨10.1016/j.nicl.2020.102184⟩

RegQCNET: Deep quality control for image-to-template brain MRI affine registration
Baudouin Denis de Senneville, Jose V. Manjon, Pierrick Coupé
Physics in Medicine and Biology, 2020, ⟨10.1088/1361-6560/abb6be⟩

A proper generalized decomposition approach for optical flow estimation
Abdallah El Hamidi, Marwan Saleh, Nicolas Papadakis, Baudouin Denis de Senneville
Mathematical Methods in the Applied Sciences, 2020, 43 (8), pp.5339-5356. ⟨10.1002/mma.6275⟩

Liver contrast-enhanced sonography: Computer-assisted differentiation between focal nodular hyperplasia and inflammatory hepatocellular adenoma by reference to microbubble transport patterns
Baudouin Denis de Senneville, Nora Frulio, Hervé Laumonier, Cécile Salut, Luc Lafitte, Hervé Trillaud
European Radiology, 2020, ⟨10.1007/s00330-019-06566-1⟩

Blind MRI Brain Lesion Inpainting Using Deep Learning
José V Manjón, José E Romero, Roberto Vivo-Hernando, Gregorio Rubio, Fernando Aparici, Maria de La Iglesia-Vaya, Thomas Tourdias, Pierrick Coupé
International Workshop on Simulation and Synthesis in Medical Imaging, Oct 2020, LIMA, Peru. pp.41-49, ⟨10.1007/978-3-030-59520-3_5⟩

Tensor-based grading: a novel patch-based grading approach for the analysis of deformation fields in Huntington’s disease
Kilian Hett, Hans Johnson, Pierrick Coupé, Jane Paulsen, Jeffrey D Long, Ipek Oguz
IEEE ISBI 2020: International Symposium on Biomedical Imaging, Apr 2020, Iowa City, United States

Patch-Based Abnormality Maps for Improved Deep Learning-Based Classification of Huntington’s Disease
Kilian Hett, Rémi Giraud, Hans Johnson, Jane Paulsen, Jeffrey Long, Ipek Oguz
Medical Image Computing and Computer Assisted Intervention – MICCAI 2020, Oct 2020, Lima, Peru. pp.636-645, ⟨10.1007/978-3-030-59728-3_62⟩

2019

LIFESPAN CHANGES OF THE HUMAN BRAIN IN ALZHEIMER’S DISEASE
Pierrick Coupé, Jose Vicente Manjon, Enrique Lanuza, Gwenaelle Catheline
Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-39809-8⟩

Optimizing 4D abdominal MRI: image denoising using an iterative back-projection approach
Baudouin Denis de Senneville, Colleen Rosalie Cardiet, Aurélien Trotier, Emeline Ribot, Luc Lafitte, Laurent Facq, Sylvain Miraux
Physics in Medicine and Biology, In press, ⟨10.1088/1361-6560/ab563e⟩

Cerebellar parcellation in schizophrenia and bipolar disorder
C. Laidi, T. Hajek, F. Spaniel, M. Kolenic, M.‐a. d’Albis, S. Sarrazin, J.‐f. Mangin, Edouard Duchesnay, P. Brambilla, M. Wessa, J. Linke, M. Polosan, P. Favre, A. Versace, M. Phillips, J. Manjon, José Romero, F. Hozer, M. Leboyer, Pierrick Coupé, J. Houenou
Acta Psychiatrica Scandinavica, 2019, 140 (5), pp.468-476. ⟨10.1111/acps.13087⟩

Multimodal Hippocampal Subfield Grading For Alzheimer’s Disease Classification
Kilian Hett, Vinh-Thong Ta, Gwenaelle Catheline, Thomas Tourdias, José V. Manjón, Pierrick Coupé
Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-49970-9⟩

Evaluating the benefit of PBS vs. VMAT dose distributions in terms of dosimetric sparing and robustness against inter-fraction anatomical changes for pediatric abdominal tumors
Filipa Guerreiro, Cornel Zachiu, Enrica Seravalli, Ribeiro Cassia Oraboni, Geert Janssens, Mario Ries, Baudouin Denis de Senneville, John H Maduro, Charlotte L Brouwer, Erik W Korevaar, Antje C Knopf, Bas W. Raaymakers
Radiotherapy & Oncology, 2019, ⟨10.1016/j.radonc.2019.06.025⟩

T2-based MRI Delta-Radiomics Improve Response Prediction in Soft-Tissue Sarcomas Treated by Neoadjuvant Chemotherapy
Amandine Crombé, Cynthia Perier, Michèle Kind, Baudouin Denis de Senneville, Francois Le Loarer, Antoine Italiano, Xavier Buy, Olivier Saut
Journal of Magnetic Resonance Imaging, 2019, 50 (2), pp.497-510. ⟨10.1002/jmri.26589⟩

STRUCTURAL CONNECTIVITY MAPPING IN THE HUMAN HIPPOCAMPAL SUBFIELDS USING SUPER-RESOLUTION HYDI
Nahla M.H. Elsaid, Pierrick Coupé, Andrew Saykin, Yu-Chien Wu
Alzheimer’s & Dementia: Diagnosis, Assessment & Disease Monitoring, 2019, 15 (7), pp.P741-P742. ⟨10.1016/j.jalz.2019.06.2775⟩

Evolution of brain atrophy subtypes during aging predicts long-term cognitive decline and future Alzheimer’s clinical syndrome
Vincent V Planche, Pierrick Coupé, Catherine Helmer, Mélanie Le Goff, Hélène Amieva, François Tison, Jean-François Dartigues, Gwenaelle Catheline
Neurobiology of Aging, 2019, 79, pp.22-29. ⟨10.1016/j.neurobiolaging.2019.03.006⟩

Influence of Different Isoflurane Anesthesia Protocols on Murine Cerebral Hemodynamics measured with pseudo-Continuous Arterial Spin Labeling
Leon P Munting, Marc Derieppe, Ernst Suidgeest, Baudouin Denis de Senneville, Jack A Wells, Louise van Der Weerd
NMR in Biomedicine, 2019, ⟨10.1002/nbm.4105⟩

Assessment of Intratumoral Doxorubicin Penetration after Mild Hyperthermia-mediated Release from Thermosensitive Liposomes
Marc Derieppe, Jean-Michel Escoffre, Baudouin Denis de Senneville, Quincy van Houtum, Angelique Barten-van Rijbroek, Kim van Der Wurff-Jacobs, Ludwig Dubois, Clemens Bos, Chrit T. W. Moonen
Contrast Media and Molecular Imaging, 2019, ⟨10.1155/2019/2645928⟩

A planning strategy for combined self-scanned/gated MR- HIFU treatment in the pancreas
Cyril Jacques J Ferrer, Clemens Bos, Baudouin Denis de Senneville, Pim T S Borman, Bjorn Stemkens, Rob H N Tijssen, Chrit T. W. Moonen, Lambertus W Bartels
International Journal of Hyperthermia, 2019

Numerical Workflow of Irreversible Electroporation for Deep-Seated Tumor
Olivier Gallinato, Baudouin Denis de Senneville, Olivier Seror, Clair Poignard
Physics in Medicine and Biology, 2019, 64 (5), pp.055016. ⟨10.1088/1361-6560/ab00c4⟩

AssemblyNet: A Novel Deep Decision-Making Process for Whole Brain MRI Segmentation
Pierrick Coupé, Boris Mansencal, Michaël Clément, Rémi Giraud, Baudouin Denis de Senneville, Vinh-Thong Ta, Vincent Lepetit, José V Manjón
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Oct 2019, Shenzhen, China. pp.466-474, ⟨10.1007/978-3-030-32248-9_52⟩

No Structural Differences Are Revealed by VBM in ‘de novo’ Parkinsonian Patients
Verónica Muñoz Ramírez, Florence Forbes, Pierrick Coupé, Michel Dojat
MEDINFO 2019 - 17th World Congress On Medical And Health Informatics, Aug 2019, Lyon, France. pp.268-272, ⟨10.3233/SHTI190225⟩

No structural Brain differences in ‘de novo’ Parkinsonian patients
Verónica Muñoz Ramírez, Florence Forbes, Pierrick Coupé, Michel Dojat
OHBM 2019 - 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. pp.1-5

Diffusion magnetic resonance imaging in the human hippocampal subfields using super-resolution HYDI
Nahla Elsaid, Pierrick Coupé, Yu-Chien Wu
ISMRM, May 2019, Montréal, Canada

Hepatic tumor diagnosis by analysing dense transport fields in contrast-enhanced ultrasound
Baudouin Denis de Senneville, Nora Frulio, Hervé Laumonier, Cécile Salut, Luc Lafitte, Hervé Trillaud
ISBI19 - 16th IEEE International Symposium on Biomedical Imaging, Apr 2019, Venise, Italy

2018

Accelerating multi-modal image registration using a supervoxel-based variational framework
L Lafitte, Cornel Zachiu, Linda Kerkmeijer, Mario Ries, Baudouin Denis de Senneville
Physics in Medicine and Biology, 2018, 63 (23), pp.235009

Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images
Aaron Carass, Jennifer Cuzzocreo, Shuo Han, Carlos Hernandez-Castillo, Paul Rasser, Melanie Ganz, Vincent Beliveau, Jose Dolz, Ismail Ben Ayed, Christian Desrosiers, Benjamin Thyreau, José E. Romero, Pierrick Coupé, Jose V. Manjon, Vladimir Fonov, D. Louis Collins, Sarah Ying, Chiadi Onyike, Deana Crocetti, Bennett Landman, Stewart Mostofsky, Paul M. Thompson, Jerry Prince
NeuroImage, 2018, 183, pp.150 - 172. ⟨10.1016/j.neuroimage.2018.08.003⟩

Longitudinal study of functional brain network reorganization in clinically isolated syndrome
Ismail Koubiyr, Mathilde Deloire, Pierre Besson, Pierrick Coupé, Cécile Dulau, Jean Pelletier, Thomas Tourdias, Bertrand Audoin, Bruno Brochet, Jean-Philippe Ranjeva, Aurélie Ruet
Multiple Sclerosis Journal, 2018, 26 (2), pp.135245851881310. ⟨10.1177/1352458518813108⟩

Antipsychotic and benzodiazepine use and brain morphology in schizophrenia and affective psychoses – Systematic reviews and birth cohort study
Sanna Huhtaniska, Iikka Korkala, Tuomas Heikka, Lassi Björnholm, Heli Lehtiniemi, Anja Hulkko, Jani Moilanen, Jussi Tohka, Jose V. Manjon, Pierrick Coupé, Vesa Kiviniemi, Matti Isohanni, Hannu Koponen, Graham Murray, Jouko Miettunen, Erika Jääskeläinen
Psychiatry Research: Neuroimaging, 2018, 281, pp.43 - 52. ⟨10.1016/j.pscychresns.2018.08.015⟩

Differential Gray Matter Vulnerability in the 1 Year Following a Clinically Isolated Syndrome
Ismail Koubiyr, Mathilde Deloire, Pierrick Coupé, Cécile Dulau, Pierre Besson, Amandine Moroso, Vincent Planche, Thomas Tourdias, Bruno Brochet, Aurélie Ruet
Frontiers in Neurology, 2018, 9, ⟨10.3389/fneur.2018.00824⟩

Adaptive fusion of texture-based grading for Alzheimer’s disease classification
Kilian Hett, Vinh-Thong Ta, José V Manjón, Pierrick Coupé
Computerized Medical Imaging and Graphics, In press

Anatomically plausible models and quality assurance criteria for online mono- and multi-modal medical image registration
Cornel Zachiu, B Denis de Senneville, Chrit T W Moonen, Bas Raaymakers, Mario Ries
Physics in Medicine and Biology, 2018, 63 (15), pp.155016

Pre-treatment magnetic resonance-based texture features as potential imaging biomarkers for predicting event free survival in anal cancer treated by chemoradiotherapy
Arnaud Hocquelet, Thibaut Auriac, Cynthia Perier, Clarisse Dromain, Marie Meyer, Jean-Baptiste Pinaquy, Alban Denys, Hervé Trillaud, Baudouin Denis de Senneville, Véronique Vendrely
European Radiology, 2018, 28 (7), pp.2801-2811. ⟨10.1007/s00330-017-5284-z⟩

Real-time 3D ultrasound based motion tracking for the treatment of mobile organs with MR-guided high-intensity focused ultrasound
Pierre Bour, Valéry Ozenne, Fabrice Marquet, Baudouin Denis de Senneville, Erik Dumont, Bruno Quesson
International Journal of Hyperthermia, 2018, 34 (8), pp.1225-1235

Fluid filling of the digestive tract for improved proton resonance frequency shift-based MR thermometry in the pancreas
Cyril Jacques Ferrer, Lambertus Bartels, Marijn van Stralen, Baudouin Denis de Senneville, Chrit T.W. Moonen, Clemens Bos
Journal of Magnetic Resonance Imaging, 2018, 47 (3), pp.692-701

Respiratory motion model based on the noise covariance matrix of a receive array
Anna Andreychenko, Baudouin Denis de Senneville, Robin Navest, Rob H.N. Tijssen, Jan J.W. Lagendijk, Cornelis van den Berg
Magnetic Resonance in Medicine, 2018, 79 (3), pp.1730-1735

Development of a Fluid Dynamic Model for Quantitative Contrast-Enhanced Ultrasound Imaging
Baudouin Denis de Senneville, Anthony Novell, Chloé J. Arthuis, Vanda Mendes, Paul-Armand Dujardin, Frédéric Patat, Ayache Bouakaz, Jean-Michel Escoffre, Franck Perrotin
IEEE Transactions on Medical Imaging, 2018, 37 (2), pp.372-383

Non-rigid CT/CBCT to CBCT registration for online external beam radiotherapy guidance
Cornel Zachiu, Baudouin Denis de Senneville, Rob Tijssen, Alexis Kotte, Antonetta Houweling, Linda Kerkmeijer, Jan Lagendijk, Chrit Moonen, Mario Ries
Physics in Medicine and Biology, In press

MRI white matter lesion segmentation using an ensemble of neural networks and overcomplete patch-based voting
José V. Manjón, Pierrick Coupé, Parnesh Raniga, Ying Xia, Patricia Desmond, Jurgen Fripp, Olivier Salvado
Computerized Medical Imaging and Graphics, In press, ⟨10.1016/j.compmedimag.2018.05.001⟩

Regional hippocampal vulnerability in early multiple sclerosis: Dynamic pathological spreading from dentate gyrus to CA1
Vincent V Planche, Ismail Koubiyr, José E. Romero, José V. Manjon, Pierrick Coupé, Mathilde Deloire, Vincent Dousset, Bruno Brochet, Aurélie Ruet, Thomas Tourdias
Human Brain Mapping, 2018, 39 (4), pp.1814-1824. ⟨10.1002/hbm.23970⟩

A fluid dynamic model for quantitative contrast-enhanced ultrasound imaging: validation for the assessment of uteroplacental perfusion
Baudouin Denis de Senneville, Anthony Novell, Chloé J. Arthuis, Vanda Mendes, Paul-Armand Dujardin, Frédéric Patat, Ayache Bouakaz, Jean-Michel Escoffre, Franck Perrotin
IEEE International Ultrasonics Symposium, Oct 2018, Kobe, Japan

Graph of brain structures grading for early detection of Alzheimer’s disease
Kilian Hett, Vinh-Thong Ta, Jose Vicente Manjon, Pierrick Coupé
Medical Image Computing and Computer-Assisted Intervention (MICCAI), Sep 2018, GRANADA, Spain

Graph of hippocampal subfields grading for Alzheimer’s disease prediction
Kilian Hett, Vinh-Thong Ta, José V Manjón, Pierrick Coupé
Machine Learning in Medical Imaging (MICCAI), Sep 2018, Granada, Spain

LesionBrain: An Online Tool for White Matter Lesion Segmentation
Pierrick Coupé, Thomas Tourdias, Pierre Linck, Jose V Romero, Jose V. Manjon
International Workshop on Patch-based Techniques in Medical Imaging (MICCAI), Sep 2018, Grenade, Spain. pp.95 - 103, ⟨10.1007/978-3-030-00500-9_11⟩

MRI Denoising Using Deep Learning
Jose V. Manjon, Pierrick Coupé
International Workshop on Patch-based Techniques in Medical Imaging (MICCAI), Sep 2018, Granada, Spain. pp.12 - 19, ⟨10.1007/978-3-030-00500-9_2⟩

Non-rigid CT to MR registration for online external beam radiotherapy guidance
Cornel Zachiu, Baudouin Denis de Senneville, Mario Ries, Fieke Prins, Bas W. Raaymakers
6th MR in RT symposium, Jun 2018, Utrecht, Netherlands

Evaluation of 2D simultaneous multi-slice EPI at 1.5T for MR-thermometry in presence of motion
Pierre Bour, Valéry Ozenne, Fabrice Marquet, Baudouin Denis de Senneville, Erik Dumont, Bruno Quesson
International Society of Magnetic Resonance in Medicine, Jun 2018, Paris, France

3D ultrasound based motion tracking combined with rapid multislice MR-thermometry for MR guided HIFU on mobile organs
Valéry Ozenne, Pierre Bour, Baudouin Denis de Senneville, Marylène Delcey, Wadie Ben Hassen, Alexis Vaussy, S Rainer, Bruno Quesson
International Society of Magnetic Resonance in Medicine, Jun 2018, Paris, France

Analysis of Contrast-Enhanced Ultrasound using fluid dynamic
Baudouin Denis de Senneville, Anthony Novell, Chloé J. Arthuis, Vanda Mendes, Paul-Armand Dujardin, Frédéric Patat, Ayache Bouakaz, Jean-Michel Escoffre, Franck Perrotin
IEEE International Symposium on Biomedical Imaging (ISBI), Apr 2018, Washington, United States

Patch-based MRI Analysis: From voxel to knowledge
Pierrick Coupé
Medical Imaging. Université de Bordeaux, 2018

2017

HIPS: A new hippocampus subfield segmentation method
José E. Romero, Pierrick Coupé, José V. Manjón
NeuroImage, 2017, 163, pp.286 - 295. ⟨10.1016/j.neuroimage.2017.09.049⟩

Real-time non-rigid target tracking for ultrasound-guided clinical interventions
Cornel Zachiu, Mario Ries, Pascal Ramaekers, Jean-Luc Guey, Chrit T. W. Moonen, Baudouin Denis de Senneville
Physics in Medicine and Biology, 2017, 62 (20), pp.8154 - 8177. ⟨10.1088/1361-6560/aa8c66⟩

Microstructural analyses of the posterior cerebellar lobules in relapsing-onset multiple sclerosis and their implication in cognitive impairment
Amandine Moroso, Aurélie Ruet, Delphine Lamargue-Hamel, Fanny Munsch, Mathilde Deloire, Pierrick Coupé, Julie Charré-Morin, Aurore Saubusse, Jean-Christophe Ouallet, Vincent Planche, Thomas Tourdias, Vincent Dousset, Bruno Brochet
PLoS ONE, 2017, 12 (8), ⟨10.1371/journal.pone.0182479⟩

Long-term antipsychotic and benzodiazepine use and brain volume changes in schizophrenia: The Northern Finland Birth Cohort 1966 study
Sanna Huhtaniska, Erika Jääskeläinen, Tuomas Heikka, Jani Moilanen, Heli Lehtiniemi, Jussi Tohka, Jose V. Manjon, Pierrick Coupé, Lassi Björnholm, Hannu Koponen, Juha Veijola, Matti Isohanni, Vesa Kiviniemi, Graham Murray, Jouko Miettunen
Psychiatry Research: Neuroimaging, 2017, 266, pp.73 - 82. ⟨10.1016/j.pscychresns.2017.05.009⟩

Towards a unified analysis of brain maturation and aging across the entire lifespan: A MRI analysis
Pierrick Coupé, Gwenaelle Catheline, Enrique Lanuza, José Vicente Manjón
Human Brain Mapping, 2017

A novel adaptive needle insertion sequencing for robotic, single needle MR-guided high-dose-rate prostate brachytherapy
Maxence Borot de Battisti, Baudouin Denis de Senneville, Gilion Hautvast, D Binnekamp, Jan Lagendijk, M Maenhout, M Moerland
Physics in Medicine and Biology, 2017

Feasibility of real-time MR thermal dose mapping for predicting radiofrequency ablation outcome in the myocardium in vivo
Solenne Toupin, Pierre Bour, Matthieu Lepetit-Coiffe, Valery Ozenne, Baudouin Denis de Senneville, Rainer Schneider, Alexis Vaussy, Arnaud Chaumeil, Hubert Cochet, Frédéric Sacher, Pierre Jais, Bruno Quesson
Journal of Cardiovascular Magnetic Resonance, 2017, 19 (1), pp.14

Combination of principal component analysis and optical-flow motion compensation for improved cardiac MR thermometry
Solenne Toupin, Baudouin Denis de Senneville, Valery Ozenne, Pierre Bour, Matthieu Lepetit-Coiffe, M Boissenin, Pierre Jais, Bruno Quesson
Physics in Medicine and Biology, 2017, 62 (4), pp.1208-1224

SuperPatchMatch: an Algorithm for Robust Correspondences using Superpixel Patches
Rémi Giraud, Vinh-Thong Ta, Aurélie Bugeau, Pierrick Coupé, Nicolas Papadakis
IEEE Transactions on Image Processing, 2017, ⟨10.1109/TIP.2017.2708504⟩

A framework for continuous target tracking during MR-guided high intensity focused ultrasound thermal ablations in the abdomen
Cornel Zachiu, Baudouin Denis de Senneville, Ivan D. Dmitriev, Chrit T. W. Moonen, Mario Ries
Journal of Therapeutic Ultrasound, 2017, 5, pp.27. ⟨10.1186/s40349-017-0106-y⟩

An Adaptive Non-Local-Means Filter for Real-Time MR-Thermometry
Cornel Zachiu, Mario Ries, Chrit Moonen, Baudouin Denis de Senneville
IEEE Transactions on Medical Imaging, 2017, 36 (4), pp.904-916. ⟨10.1109/TMI.2016.2627221⟩

A comparison of accurate automatic hippocampal segmentation methods
Azar Zandifar, Vladimir Fonov, Pierrick Coupé, Jens Pruessner, D Louis Collins
NeuroImage, 2017, ⟨10.1016/j.neuroimage.2017.04.018⟩

Effect of intra-fraction motion on the accumulated dose for free-breathing MR-guided stereotactic body radiation therapy of renal-cell carcinoma
Bjorn Stemkens, Markus Glitzner, Charis Kontaxis, Baudouin Denis de Senneville, Fieke Prins, Sjoerd Crijns, Linda Kerkmeijer, Jan Lagendijk, C. van den Berg, Rob Tijssen
Physics in Medicine and Biology, 2017

Microstructural alterations precede subcortical deep grey matter volume loss in patients with clinically isolated syndrome
Ismail Koubiyr, Mathilde S. A. Deloire, Julie Charré-Morin, Aurore Saubusse, Pierrick Coupé, Cécile Dulau, Thomas Tourdias, Pierre Besson, J.P. Ranjeva, Jean Pelletier, Bertrand Audoin, B Brochet, Aurélie Ruet
ECTRIMS, Oct 2017, Paris, France

Relationships between reorganization of functional brain network topology and cognition in clinically isolated syndrome: A 1 year Resting-state fMRI longitudinal study
Ismail Koubiyr, Mathilde S. A. Deloire, Julie Charré-Morin, Aurore Saubusse, Pierrick Coupé, Cécile Dulau, Thomas Tourdias, Jean-Philippe Ranjeva, Jean Pelletier, Bertrand Audoin, Bruno Brochet, Aurélie Ruet
ECTRIMS, Oct 2017, Paris, France

Hippocampus Subfield Segmentation Using a Patch-Based Boosted Ensemble of Autocontext Neural Networks
José V Manjón, Pierrick Coupé
International Workshop on Patch-based Techniques in Medical Imaging (MICCAI), Sep 2017, Québec, Canada. ⟨10.1007/978-3-319-67434-6_4⟩

Early Prediction of Alzheimer’s Disease with Non-local Patch-Based Longitudinal Descriptors
Gerard Sanroma, Víctor Andrea, Oualid M Benkarim, José V Manjón, Pierrick Coupé, Oscar Camara, Gemma Piella, Miguel A González Ballester
International Workshop on Patch-based Techniques in Medical Imaging (MICCAI), Sep 2017, Québec, Canada. ⟨10.1007/978-3-319-67434-6_9⟩

Adaptive fusion of texture-based grading: Application to Alzheimer’s disease detection
Kilian Hett, Vinh-Thong Ta, José V Manjón, Pierrick Coupé
PatchMI: 3rd International Workshop on Patch-based Techniques in Medical Imaging, Sep 2017, Quebec, Canada

Accuracy of MRI classification algorithms in a tertiary memory center clinical routine cohort
Alexandre Morin, Jorge Samper-Gonzales, Anne Bertrand, Enrica Cavedo, Simone Lista, Didier Dormont, Aline Mendes, Pierrick Coupé, Jamila Ahdidan, Marcel Levy, Agnès Michon, Dalila Samri, Marc Teichmann, Harald Hampel, Bruno Dubois, Stéphane Epelbaum, Olivier Colliot
AAIC 2017 - Alzheimer’s Association International Conference, Jul 2017, London, United Kingdom. pp.P772-P774, ⟨10.1016/j.jalz.2017.06.1034⟩

Evaluation of cardiac magnetic resonance thermometry in patients
Valery Ozenne, Solenn Toupin, Pierre Bour, Baudouin Denis de Senneville, Alexis Vaussy, Matthieu Lepetit-Coiffé, Pierre Jaïs, Hubert Cochet, Bruno Quesson
Heart Rhythm 2017, May 2017, Chicago, United States

Evaluation of cardiac magnetic resonance thermometry in patients
Valery Ozenne, Solenn Toupin, Pierre Bour, Baudouin Denis de Senneville, Alexis Vaussy, Matthieu Lepetit-Coiffé, Pierre Jaïs, Hubert Cochet, Bruno Quesson
International Society of Magnetic Resonance in Medicine 2017, Apr 2017, Honolulu, United States

2016

Real-time auto-adaptive margin generation for MLC-tracked radiotherapy
Markus Glitzner, M Fast, Baudouin Denis de Senneville, S. Nill, U. Oelfke, Jan Lagendijk, Bas Raaymakers, Sjoerd Crijns
Physics in Medicine and Biology, 2016, 62 (1), pp.186-201

Magnetic resonance texture parameters are associated with ablation efficiency in MR-guided high-intensity focussed ultrasound treatment of uterine fibroids
Arnaud Hocquelet, Baudouin Denis de Senneville, Nora Frulio, C. Salut, Mounir Bouzgarrou, Panteleimon Papadopoulos, Hervé Trillaud
International Journal of Hyperthermia, 2016

Posterior lobules of the cerebellum and information processing speed at various stages of multiple sclerosis
Amandine Moroso, Aurélie Ruet, Delphine Lamargue-Hamel, Fanny Munsch, Mathilde Deloire, Pierrick Coupé, Jean-Christophe Ouallet, Vincent Planche, Nicolas Moscufo, Dominik S Meier, Thomas Tourdias, Charles R G Guttmann, Vincent Dousset, Bruno Brochet
Journal of Neurology, Neurosurgery and Psychiatry, 2016, ⟨10.1136/jnnp-2016-313867⟩

EVolution: an Edge-based Variational method for non-rigid multi-modal image registration
Baudouin Denis de Senneville, Cornel Zachiu, Mario Ries, Chrit Moonen
Physics in Medicine and Biology, 2016, 61 (20), pp.7377-7396. ⟨10.1088/0031-9155/61/20/7377⟩

FBG-based sensing for real-time needle tracking during MR-guided brachytherapy
Maxence Borot de Battisti, Baudouin Denis de Senneville, M Maenhout, Gilion Hautvast, D Binnekamp, Jan Lagendijk, Marco van Vulpen, M Moerland
Medical Physics, 2016

Image-driven, model-based 3D abdominal motion estimation for MR-guided radiotherapy
Bjorn Stemkens, Rob Tijssen, Baudouin Denis de Senneville, Jan Lagendijk, C. van den Berg
Physics in Medicine and Biology, 2016, 61 (14)

Adaptive planning strategy for HDR prostate brachytherapy - a simulation study on needle positioning errors
Maxence Borot de Battisti, Baudouin Denis de Senneville, M Maenhout, Gilion Hautvast, D Binnekamp, Jan Lagendijk, Marco van Vulpen, M Moerland
Physics in Medicine and Biology, 2016

Improved Cardiac Magnetic Resonance-Thermometry and dosimetry for monitoring lesion formation during catheter ablation
Valéry Ozenne, Solenne Toupin, Pierre Bour, Baudouin Denis de Senneville, Matthieu Lepetit-Coiffé, M Boissenin, Jenny Benois-Pineau, Michael Hansen, Souheil Inati, Assaf Govari, Pierre Jais, Bruno Quesson
Magnetic Resonance in Medicine, 2016

MRI monitoring of nanocarrier accumulation and release using Gadolinium-SPIO co-labelled thermosensitive liposomes
Cyril Lorenzato, Chris Oerlemans, M. van Elk, W. Geerts, Baudouin Denis de Senneville, Chrit Moonen, Clemens Bos
Contrast Media and Molecular Imaging, 2016

Non Local Spatial and Angular Matching : Enabling higher spatial resolution diffusion MRI datasets through adaptive denoising
Samuel St-Jean, Pierrick Coupé, Maxime Descoteaux
Medical Image Analysis, 2016, ⟨10.1016/j.media.2016.02.010⟩

Early Fiber Number Ratio Is a Surrogate of Corticospinal Tract Integrity and Predicts Motor Recovery After Stroke
Antoine Bigourdan, Fanny Munsch, Pierrick Coupé, Charles R. G. Guttmann, Sharmila Sagnier, Pauline Renou, Sabrina Debruxelles, Mathilde Poli, Vincent Dousset, Igor Sibon, Thomas Tourdias
Stroke, 2016, ⟨10.1161/STROKEAHA.115.011576⟩

CERES: A new cerebellum lobule segmentation method
Jose E Romero, Pierrick Coupé, Rémi Giraud, Vinh-Thong Ta, Vladimir S Fonov, Min Tae Park, Mallar M Chakravarty, Aristotle N Voineskos, Jose V Manjón
NeuroImage, 2016, ⟨10.1016/j.neuroimage.2016.11.003⟩

Hippocampal microstructural damage correlates with memory impairment in clinically isolated syndrome suggestive of multiple sclerosis
Vincent V Planche, Aurélie Ruet, Pierrick S Coupé, Delphine Lamargue-Hamel, Mathilde Deloire, Bruno Pereira, José S Manjon, Fanny Munsch, Nicola Moscufo, Dominik S Meier, Charles R G Guttmann, Vincent V Dousset, Bruno Brochet, Thomas Tourdias
Multiple Sclerosis Journal, 2016, 33, pp.1596 - 1596. ⟨10.1177/1352458514567727⟩

Automatic thalamus and hippocampus segmentation from MP2RAGE: comparison of publicly available methods and implications for DTI quantification
Erhard Næss-Schmidt, Anna Tietze, Jakob Udby Blicher, Mikkel Petersen, Irene K. Mikkelsen, Pierrick Coupé, José V. Manjón, Simon Fristed Eskildsen
International Journal of Computer Assisted Radiology and Surgery, 2016, ⟨10.1007/s11548-016-1433-0⟩

Three-Dimensional Measurement Of hepatocellular carcinoma Ablation Zones And Margins For Predicting Local Tumor Progression
Arnaud Hocquelet, Hervé Trillaud, Nora Frulio, Panteleimon Papadopoulos, P. Balageas, C. Salut, Marie Meyer, Jean-Frédéric Blanc, Michel Montaudon, Baudouin Denis de Senneville
JVIR: Journal of Vascular and Interventional Radiology, 2016, 27 (7), pp.1038-1045.e2. ⟨10.1016/j.jvir.2016.02.031⟩

Optic Radiations Microstructural Changes in Glaucoma and Association With Severity: A Study Using 3Tesla-Magnetic Resonance Diffusion Tensor Imaging
Laury Tellouck, Muriel Durieux, Pierrick Coupé, Audrey Cougnard-Grégoire, Joy Tellouck, Thomas Tourdias, Fanny Munsch, Arnaud Garrigues, Catherine Helmer, Florence Malet, Jean-François Dartigues, Vincent Dousset, Cecile Delcourt, Cédric Schweitzer
Investigative Ophthalmology & Visual Science, 2016, 57, pp.6539 - 6539. ⟨10.1167/iovs.16-19838⟩

An Optimized PatchMatch for multi-scale and multi-feature label fusion
Rémi Giraud, Vinh-Thong Ta, Nicolas Papadakis, Jose Vicente Manjon, D Louis Collins, Pierrick Coupé
NeuroImage, 2016, 124, pp.770-782. ⟨10.1016/j.neuroimage.2015.07.076⟩

HIST: HyperIntensity Segmentation Tool
Jose V Manjón, Pierrick Coupé, Parnesh Raniga, Ying Xia, Jurgen Fripp, Olivier Salvado
Patch-Based Techniques in Medical Imaging (MICCAI), Oct 2016, Athènes, Greece. pp.92 - 99, ⟨10.1007/978-3-319-47118-1_12⟩

Non-local MRI Library-Based Super-Resolution: Application to Hippocampus Subfield Segmentation
Jose V Romero, Pierrick Coupé, Jose V Manjón
Patch-Based Techniques in Medical Imaging (MICCAI), Oct 2016, Athènes, Greece. pp.68 - 75, ⟨10.1007/978-3-319-47118-1_9⟩

Patch-based DTI grading: Application to Alzheimer’s disease classication
Kilian Hett, Vinh-Thong Ta, Rémi Giraud, Mary Mondino, José V Manjón, Pierrick Coupé
Second International Workshop, Patch-MI 2016, Held in Conjunction with MICCAI 2016, Oct 2016, Athens, Greece

High Resolution Hippocampus Subfield Segmentation Using Multispectral Multiatlas Patch-Based Label Fusion
José V Romero, Pierrick Coupe, José V Manjón
Patch-Based Techniques in Medical Imaging (MICCAI), Oct 2016, Athènes, Greece. pp.117 - 124, ⟨10.1007/978-3-319-47118-1_15⟩

Sparse-Based Morphometry: Principle and Application to Alzheimer’s Disease
Pierrick Coupé, Charles Deledalle, Charles H Dossal, Michèle Allard
Patch-Based Techniques in Medical Imaging (MICCAI), Oct 2016, Athènes, Greece. ⟨10.1007/978-3-319-47118-1_6⟩

An improved tracking technique for real-time MR-guided beam therapies in moving organs
Cornel Zachiu, Mario Ries, Chrit Moonen, Baudouin Denis de Senneville
International Society of Magnetic Resonance in Medicine, May 2016, Singapour, Singapore

ASSESSMENT OF DOXORUBICIN PENETRATION IN THE TUMOR MICROENVIRONMENT AFTER RELEASE FROM THERMOSENSITIVE LIPOSOMES DURING MILD HYPERTHERMIA
M Derieppe, Baudouin Denis de Senneville, J.-M Escoffre, Q van Houtum, A Barten van Rijbroek, C Bos, C Moonen
IEEE International Symposium on Biomedical Imaging (ISBI), May 2016, Prague, France

Evaluation of common proton resonance frequency shift based MR Thermometry methods in the pancreas
Cyril Jacques Ferrer, Clemens Bos, M van Stralen, Baudouin Denis de Senneville, Chrit Moonen, H.W. Bartels
International Society of Magnetic Resonance in Medicine, May 2016, Singapour, Singapore

In-vivo echo-navigated MR thermometry for real-time monitoring of cardiac radiofrequency ablation
Solenne Toupin, Matthieu Lepetit-Coiffé, Pierre Bour, Valéry Ozenne, Baudouin Denis de Senneville, Rainer Schneider, K. Jenkins, Arnaud Chaumeil, Pierre Jais, Bruno Quesson
International Society of Magnetic Resonance in Medicine, May 2016, Singapour, Singapore

First clinical evaluation of real-time cardiac MR thermometry
Valéry Ozenne Ozenne, Solenne Toupin, Pierre Bour, Baudouin Denis de Senneville, Alexis Vaussy, Matthieu Lepetit-Coiffé, Pierre Jais, Hubert Cochet, Bruno Quesson
International Society of Magnetic Resonance in Medicine, May 2016, Singapour, Singapore

An improved optical flow tracking technique for real-time MR-guided beam therapies in moving organs
Cornel Zachiu, Nicolas Papadakis, Mario Ries, Chrit Moonen, Baudouin Denis de Senneville
IEEE International Symposium on Biomedical Imaging (ISBI’16), Apr 2016, Prague, Czech Republic

MRI guided HIFU methods for the ablation of liver and renal cancers
Baudouin Denis de Senneville, Chrit Moonen, Mario Ries
Therapeutic Ultrasound, Springer, pp.43-63, 2016

2015

Correction for Photobleaching in Dynamic Fluorescence Microscopy: Application in the Assessment of Pharmacokinetic Parameters in Ultrasound-Mediated Drug Delivery
Marc Derieppe, Clemens Bos, M. de Greef, Chrit Moonen, Baudouin Denis de Senneville
Physics in Medicine and Biology, 2015

Correction for Photobleaching in Dynamic Fluorescence Microscopy: Application in the Assessment of Pharmacokinetic Parameters in Ultrasound-Mediated Drug Delivery
Marc Derieppe, Clemens Bos, M. de Greef, Chrit Moonen, Baudouin Denis de Senneville
Physics in Medicine and Biology, 2015, 61 (2), pp.588

Non-Local Means Inpainting of MS Lesions in Longitudinal Image Processing
Nicolas Guizard, Kunio Nakamura, Pierrick Coupé, Vladimir S. Fonov, Douglas L. Arnold, D. Louis Collins
Frontiers in Aging Neuroscience, 2015, 9, ⟨10.3389/fnins.2015.00456⟩

An improved optical flow tracking technique for real-time MR-guided beam therapies in moving organs
Cornel Zachiu, Nicolas Papadakis, Mario Ries, Chrit Moonen, Baudouin Denis de Senneville
Physics in Medicine and Biology, 2015

Detection of Alzheimer’s disease signature in MR images seven years before conversion to dementia: Toward an early individual prognosis.
Pierrick Coupé, Vladimir S Fonov, Charlotte Bernard, Azar Zandifar, Simon F Eskildsen, Catherine Helmer, José V Manjón, Hélène Amieva, Jean-François Dartigues, Michèle Allard, Gwenaelle Catheline, D Louis Collins
Human Brain Mapping, 2015, ⟨10.1002/hbm.22926⟩

On-line 3D motion estimation using low resolution MRI
Markus Glitzner, Baudouin Denis de Senneville, Jan Lagendijk, Bas Raaymakers, Sjoerd Crijns
Physics in Medicine and Biology, 2015

An automated optimization tool for high-dose-rate (HDR) prostate brachytherapy with divergent needle pattern
Maxence Borot de Battisti, M Maenhout, Baudouin Denis de Senneville, Gilion Hautvast, D Binnekamp, Jan Lagendijk, Marco van Vulpen, M Moerland
Physics in Medicine and Biology, 2015, 60 (19), pp.7567-7583

Recruitment of endocytosis in sonopermeabilization-mediated drug delivery: a real-time study
Marc Derieppe, Katarzyna Rojek, Jean-Michel Escoffre, Baudouin Denis de Senneville, Chrit Moonen, Clemens Bos
Physical Biology, 2015, 12 (4), pp.046010. ⟨10.1088/1478-3975/12/4/046010⟩

Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: the CADDementia challenge.
Esther E Bron, Marion Smits, Wiesje M van Der Flier, Hugo Vrenken, Frederik Barkhof, Philip Scheltens, Janne M Papma, Rebecca M E Steketee, Carolina Méndez Orellana, Rozanna Meijboom, Madalena Pinto, Joana R Meireles, Carolina Garrett, António J Bastos-Leite, Ahmed Abdulkadir, Olaf Ronneberger, Nicola Amoroso, Roberto Bellotti, David Cárdenas-Peña, Andrés M Álvarez-Meza, Chester V Dolph, Khan M Iftekharuddin, Simon F Eskildsen, Pierrick Coupé, Vladimir S Fonov, Katja Franke, Christian Gaser, Christian Ledig, Ricardo Guerrero, Tong Tong, Katherine R Gray, Elaheh Moradi, Jussi Tohka, Alexandre Routier, Stanley Durrleman, Alessia Sarica, Giuseppe Di Fatta, Francesco Sensi, Andrea Chincarini, Garry M Smith, Zhivko V Stoyanov, Lauge Sørensen, Mads Nielsen, Sabina Tangaro, Paolo Inglese, Christian Wachinger, Martin Reuter, John C van Swieten, Wiro J Niessen, Stefan Klein
NeuroImage, 2015, 111, pp.562-79. ⟨10.1016/j.neuroimage.2015.01.048⟩

MRI noise estimation and denoising using non-local PCA
José V. Manjón, Pierrick Coupé, Antonio Buades
Medical Image Analysis, 2015, 22 (1), pp.35-47. ⟨10.1016/j.media.2015.01.004⟩

Recruitment of endocytosis in sonopermeabilization-mediated drug delivery: A real-time study
Marc Derieppe, Katarzyna Rojek, Jean-Michel Escoffre, Baudouin Denis de Senneville, Chrit T. W. Moonen, Clemens Bos
Physical Biology, 2015

A direct PCA-based approach for real-time description of physiological organ deformations
Baudouin Denis de Senneville, Abdallah El Hamidi, Chrit Moonen
IEEE Transactions on Medical Imaging, 2015, 34 (4), pp.974-982. ⟨10.1109/TMI.2014.2371995⟩

A framework for the correction of slow physiological drifts during MR-guided HIFU therapies: Proof of concept
Cornel Zachiu, Baudouin Denis de Senneville, Chrit T. W. Moonen, Mario Ries
Medical Physics, 2015, 42 (7), pp.4137-4148

Performance analysis of a dedicated breast MR-HIFU system for tumor ablation in breast cancer patients
Roel Deckers, L Merckel, Baudouin Denis de Senneville, Gerald Schubert, Max Köhler, F Knuttel, W Mali, Chrit Moonen, M. van den Bosch, Lambertus Bartels
Physics in Medicine and Biology, 2015, 60 (14), pp.5527-5542

NABS: Non-local Automatic Brain Hemisphere Segmentation.
José E Romero, José V Manjón, Jussi Tohka, Pierrick Coupé, Montserrat Robles
Magnetic Resonance Imaging, 2015, In press. ⟨10.1016/j.mri.2015.02.005⟩

Edge-based multi-modal registration and application for night vision devices
Camille Sutour, Jean-François Aujol, Charles-Alban Deledalle, Baudouin Denis de Senneville
Journal of Mathematical Imaging and Vision, 2015, pp.1-20. ⟨10.1007/s10851-014-0554-8⟩

Rotation-invariant multi-contrast non-local means for MS lesion segmentation
Nicolas Guizard, Pierrick Coupé, Vladimir S. Fonov, Jose V. Manjón, Douglas L. Arnold, D. Louis Collins
Neuroimage-Clinical, 2015, 8, pp.376–389. ⟨10.1016/j.nicl.2015.05.001⟩

Optimizing 4-dimensional magnetic resonance imaging data sampling for respiratory motion analysis of pancreatic tumors
Bjorn Stemkens, Rob Tijssen, Baudouin Denis de Senneville, Hanne D Heerkens, Marco van Vulpen, Jan Lagendijk, C. van den Berg
International Journal of Radiation Oncology, Biology, Physics, 2015, 91 (3), pp.571-578. ⟨10.1016/j.ijrobp.2014.10.050⟩

On the Suitability of Elekta’s Agility 160 MLC for Tracked Radiation Delivery: Closed-loop Machine Performance
M Glitzner, S P M Crijns, Baudoin Denis de Senneville, J W Lagendijk, B W Raaymakers
Physics in Medicine and Biology, 2015, 60 (5), pp.2005-2017. ⟨10.1088/0031-9155/60/5/2005/meta⟩

Magnetic Resonance Imaging guided cardiac radiofrequency ablation
Valery Ozenne, Solenne Toupin, Pierre Bour, Aurélie Emilien, F. Vaillant, Baudouin Denis de Senneville, Pierre Jaïs, Jenny Benois-Pineau, Pascal Desbarats, Bruno Quesson
Innovation and Research in BioMedical engineering, 2015

On-line MR imaging for dose validation of abdominal radiotherapy
Markus Glitzner, Sjoerd Crijns, Baudouin Denis de Senneville, Charis Kontaxis, Fieke Prins, Jan Lagendijk, Bas Raaymakers
Physics in Medicine and Biology, 2015

Patch-Based Segmentation from MP2RAGE Images: Comparison to Conventional Techniques
Erhard T Naess-Schmidt, Anna Tietze, Irene K Mikkelsen, Mikkel Petersen, Jakob U Blicher, Pierrick Coupé, José V. Manjón, Simon F. Eskildsen
First International Workshop on Patch-based Techniques in Medical Images (Patch-MI 2015) (MICCAI), Oct 2015, Munich, Germany. pp.180-187, ⟨10.1007/978-3-319-28194-0_22⟩

Hippocampal microstructural damage and memory impairment in clinically isolated syndrome
Vincent Planche, Aurélie Ruet, Pierrick Coupé, Delphine Lamargue, Mathilde Deloire, Fanny Munsch, Aurore Saubusse, Julie Charré-Morin, Nicolas Moscufo, Dominik Meier, C. R. G. Guttmann, Vincent Dousset, Bruno Brochet, Thomas Tourdias
ECTRIMS, Oct 2015, Barcelona, Spain. pp.363

Cerebellar sub-structures in cognitive impairment: volumetric and microstructural analyses at different stages of multiple sclerosis
Amadine Moroso, Aurélie Ruet, Delphine Lamargue, Fanny Munsch, Mathilde Deloire, Pierrick Coupé, Jean-Christophe Ouallet, Vincent Planche, Nicolas Moscufo, Dominik Meier, Thomas Tourdias, C. R. G. Guttmann, Vincent Dousset, Bruno Brochet
ECTRIMS, Oct 2015, Barcelona, Spain. pp.365

volBrain: An online MRI brain volumetry system
Jose Vicente Manjon, Pierrick Coupé
Organization for Human Brain Mapping’15, Jun 2015, Honolulu, United States

Motion correction strategies for cardiac MR thermometry during RF-ablation
Valery Ozenne, Solenne Toupin, Baudouin Denis de Senneville, Pierre Bour, F. Vaillant, Matthieu Lepetit-Coiffe, Pierre Jaïs, B. Quesson
International Society of Magnetic Resonance in Medicine, May 2015, Toronto, Canada

Motion model based on the noise covariance matrix of a receive array
Anna Andreychenko, Baudouin Denis de Senneville, R. Navest, Jan Lagendijk, C. van den Berg
International Society of Magnetic Resonance in Medicine, May 2015, Toronto, Canada

Estimating dynamic 3D abdominal motion for radiation dose accumulation mapping using a PCA-based model and 2D navigators
Bjorn Stemkens, Rob Tijssen, Baudouin Denis de Senneville, Jan Lagendijk, C. van den Berg
International Society of Magnetic Resonance in Medicine, May 2015, Toronto, Canada

CORRECTION OF PHOTOBLEACHING FOR THE ASSESSMENT OF PHARMACOKINETIC PARAMETERS USING DYNAMIC FLUORESCENCE MICROSCOPY
Marc Derieppe, Clemens Bos, M. de Greef, Chrit Moonen, Baudouin Denis de Senneville
IEEE International Symposium on Biomedical Imaging (ISBI), May 2015, New-York, United States

Real-time estimation and characterization of physiological organ deformations for MR-guided interventional therapies
Baudouin Denis de Senneville, Abdallah El-Hamidi, Chrit Moonen
IEEE International Symposium on Biomedical Imaging (ISBI), Apr 2015, New-York, United States

2014

Rapid Dynamic Temperature/R1/R2* Assessment : A Method With Potential For Monitoring Drug Delivery
Cyril Lorenzato, Chris Oerlemans, Alexandru Cernicanu, Mario Ries, Baudouin Denis de Senneville, Chrit Moonen, Clemens Bos
Nuclear Magnetic Resonance in Biomedicine, 2014

Structural imaging biomarkers of Alzheimer’s disease: predicting disease progression
Simon F. Eskildsen, Pierrick Coupé, Vladimir Fonov, Jens C. Pruessner, Louis Collins
Neurobiology of Aging, 2014, ⟨10.1016/j.neurobiolaging.2014.04.034⟩

NICE: Non-local Intracranial Cavity Extraction
José V. Manjón, Simon F. Eskildsen, Pierrick Coupé, José E. Romero, Louis D. Collins, Montserrat Robles
International Journal of Biomedical Imaging, 2014

A UNIFIED ASSESSMENT OF FULLY AUTOMATED HIPPOCAMPUS SEGMENTATION METHODS
Azar Zandifar, Vladimir Fonov, Pierrick Coupé, Jens C. Pruessner, D. Louis Collins
Alzheimer’s & Dementia : the Journal of the Alzheimer’s Association, 2014, 10 (4), pp.86. ⟨10.1016/j.jalz.2014.05.156⟩

Rapid dynamic R1/R2*/temperature assessment: a method with potential for monitoring drug delivery
Cyril Lorenzato, Chris Oerlemans, Alexandru Cernicanu, Mario Ries, Baudouin Denis de Senneville, Chrit Moonen, Clemens Bos
NMR in Biomedicine, 2014, 27 (11), pp.1267-1274. ⟨10.1002/nbm.3182⟩

Tracking of Cell Nuclei for Assessment of In Vitro Uptake Kinetics in Ultrasound-Mediated Drug Delivery using Fibered Confocal Fluorescence Microscopy
Marc Derieppe, Baudouin Denis de Senneville, Hugo Kuijf, Chrit Moonen, Clemens Bos
Molecular Imaging and Biology, 2014, 16 (5), pp.642-651. ⟨10.1007/s11307-014-0726-3⟩

Anatomically Constrained Weak Classifier Fusion for Early Detection of Alzheimer’s Disease
Mawulawoé Komlagan, Vinh-Thong Ta, Xingyu Pan, Jean-Philippe Domenger, D. Louis Collins, Pierrick Coupé
5th International Workshop on Machine Learning in Medical Imaging, Sep 2014, United States. 8 p

Optimized PatchMatch for Near Real Time and Accurate Label Fusion
Vinh-Thong Ta, Rémi Giraud, D. Louis Collins, Pierrick Coupé
MICCAI 2014, Sep 2014, United States. 8 p

Non-local PCA-based MRI denoising
Jose Vicente Manjon, Pierrick Coupé, Antoni Buades
Organization for Human Brain Mapping 2014 Annual Meeting, Jun 2014, Hamburg, Germany

Impact of DWI denoising on Track-Density Imaging
Pierrick Coupé, Olivier Périot, Jose Vicente Manjon, Bassem Hiba, Michèle Allard
Organization for Human Brain Mapping 2014 Annual Meeting, Jun 2014, Germany

Evaluation of respiration-induced magnetic field disturbance correction of MR thermometry in volunteers and in patients for MR-HIFU ablation of breast cancer: the effects of conscious sedation
Roel Deckers, Baudouin Denis de Senneville, Gerald Schubert, L Merckel, H. Vaessen, M. van den Bosch, Chrit Moonen, H.W. Bartels
International Society of Magnetic Resonance in Medicine, May 2014, Milan, Italy

Rapid Dynamic Temperature/T1/T2* Assessment: A Method With Potential For Monitoring Drug Delivery
Cyril Lorenzato, Chris Oerlemans, Baudouin Denis de Senneville, Chrit Moonen, Clemens Bos
International Society of Magnetic Resonance in Medicine, May 2014, Milan, Italy

Optimal MRI sampling and binning for online 4D retrospective respiratory motion analysis of the abdomen
Bjorn Stemkens, Rob Tijssen, Baudouin Denis de Senneville, Jan Lagendijk, C. van den Berg
International Society of Magnetic Resonance in Medicine, May 2014, Milan, Italy

Non Local Spatial and Angular Matching : a new denoising technique for diffusion MRI
Samuel St-Jean, Pierrick Coupé, Maxime Descoteaux
Joint Annual Meeting ISMRM-ESMRMB 2014, May 2014, Italy

Combined Magnetic Resonance and Ultrasound Echography Guidance for direct and indirect motion tracking
Baudouin Denis de Senneville, Yvan Regard, Chrit Moonen, Mario Ries
IEEE International Symposium on Biomedical Imaging, Apr 2014, Beijing, China

Cell Tracking for Assessment of In-Vitro Uptake Kinetics in Ultrasound-Mediated Drug Delivery using Fibered Confocal Fluorescence Microscopy
Marc Derieppe, Baudouin Denis de Senneville, Hugo Kuijf, Clemens Bos, Chrit Moonen
IEEE International Symposium on Biomedical Imaging (ISBI), Apr 2014, Beijing, China

Motion Correction Techniques for MR-Guided HIFU Ablation of Abdominal Organs
Sébastien Roujol, Chrit Moonen, Baudouin Denis de Senneville
Frontiers of Medical Imaging, World Scientific, pp.355-376, 2014

2013

Diffusion Weighted Image Denoising Using Overcomplete Local PCA
José V. Manjón, Pierrick Coupé, Luis Concha, Antoni Buades, Louis D. Collins, Robles Montserrat
PLoS ONE, 2013, 8 (9), pp.e73021. ⟨10.1371/journal.pone.0073021⟩

Collaborative patch-based super-resolution for diffusion-weighted images.
Pierrick Coupé, José V Manjón, Maxime Chamberland, Maxime Descoteaux, Bassem Hiba
NeuroImage, 2013, epub ahead of print. ⟨10.1016/j.neuroimage.2013.06.030⟩

Extended Kalman Filtering for continuous volumetric MR-Temperature Imaging
Baudouin Denis de Senneville, Sébastien Roujol, Silke Hey, Chrit Moonen, Mario Ries
IEEE Transactions on Medical Imaging, 2013, 32 (4), pp.711-718

Segmentation of MR images via discriminative dictionary learning and sparse coding: Application to hippocampus labeling.
Tong Tong, Robin Wolz, Pierrick Coupé, Joseph V Hajnal, Daniel Rueckert
NeuroImage, 2013, epub ahead of print. ⟨10.1016/j.neuroimage.2013.02.069⟩

MRI contrast variation of thermosensitive magnetoliposomes triggered by focused ultrasound: a tool for image guided local drug delivery
Cyril Lorenzato, Alexandru Cernicanu, Marie-Edith Meyre, Matthieu Germain, Agnès Pottier., Laurent Levy, Baudouin Denis de Senneville, Clemens Bos, Chrit Moonen, Pierre Smirnov
Contrast Media and Molecular Imaging, 2013, pp.185-192

Volumetric analysis of medial temporal lobe structures in brain development from childhood to adolescence.
Shiyan Hu, Jens C Pruessner, Pierrick Coupé, D Louis Collins
NeuroImage, 2013, 74C, pp.276-287. ⟨10.1016/j.neuroimage.2013.02.032⟩

Real-Time Assessment of Ultrasound-Mediated Drug Delivery Using Fibered Confocal Fluorescence Microscopy
Marc Derieppe, Anna Yudina, Matthieu Lepetit-Coiffé, Baudouin Denis de Senneville, Clemens Bos, Chrit Moonen
Molecular Imaging and Biology, 2013, 15 (1), pp.3-11

Automated segmentation of basal ganglia and deep brain structures in MRI of Parkinson’s disease
Claire Haegelen, Pierrick Coupé, Vladimir Fonov, Nicolas Guizard, Pierre Jannin, Xavier Morandi, D Louis Collins
International Journal of Computer Assisted Radiology and Surgery, 2013, 8 (1), pp.99-110. ⟨10.1007/s11548-012-0675-8⟩

MRI contrast variation of thermosensitive magnetoliposomes triggered by focused ultrasound: a tool for image-guided local drug delivery
Cyril Lorenzato, Alexandru Cernicanu, Marie-Edith Meyre, Matthieu Germain, Agnès Pottier, Laurent Levy, Baudouin Denis de Senneville, Clemens Bos, Chrit Moonen, Pierre Smirnov
Contrast Media and Molecular Imaging, 2013, 8 (2), pp.185-192

Extended Kalman Filtering for Continuous Volumetric MR-Temperature Imaging
Baudouin Denis de Senneville, Sébastien Roujol, Silke Hey, Chrit Moonen, Mario Ries
IEEE Transactions on Medical Imaging, 2013, 32 (4), pp.711-718. ⟨10.1109/TMI.2012.2234760⟩

Particle Swarm Optimization in Multi-Tensor Imaging
Micheal Paquette, Eleftherios Garyfallidis, Samuel St-Jean, Pierrick Coupé, Maxime Descoteaux
IEEE International Symposium on Biomedical Imaging (ISBI 2013), Apr 2013, United States. pp.16

Real-time anticipation of organ displacement for MR-guidance of interventional procedures
Baudouin Denis de Senneville, Mario Ries, Chrit Moonen
IEEE International Symposium on Biomedical Imaging, Apr 2013, France

Deconvolution enhanced Generalized Q-Sampling 2 and DSI deconvolution
Eleftherios Garyfallidis, Michael Paquette, Samuel St-Jean, Pierrick Coupé, Maxime Descoteaux
IEEE International Symposium on Biomedical Imaging (ISBI 2013), Apr 2013, United States. pp.18

Constrained spherical deconvolution on signal and ODF values
Eleftherios Garyfallidis, Samuel St-Jean, Michael Paquette, Pierrick Coupé, Maxime Descoteaux
IEEE International Symposium on Biomedical Imaging (ISBI 2013), Apr 2013, United States. pp.17

2012

Prediction of Alzheimer’s disease in subjects with mild cognitive impairment from the ADNI cohort using patterns of cortical thinning.
Simon F. Eskildsen, Pierrick Coupé, Daniel García-Lorenzo, Vladimir Fonov, Jens C Pruessner, D Louis Collins
NeuroImage, 2012, 65, pp.511-521. ⟨10.1016/j.neuroimage.2012.09.058⟩

Scoring by nonlocal image patch estimator for early detection of Alzheimer’s disease
Pierrick Coupé, Simon F. Eskildsen, Jose V. Manjon, Vladimir Fonov, Jens C. Pruessner, Michèle Allard, Louis Collins
Neuroimage-Clinical, 2012, 1 (1), pp.141-152. ⟨10.1016/j.nicl.2012.10.002⟩

Nonlocal regularization for active appearance model: Application to medial temporal lobe segmentation.
Shiyan Hu, Pierrick Coupé, Jens C Pruessner, D Louis Collins
Human Brain Mapping, 2012, epub ahead of print. ⟨10.1002/hbm.22183⟩

Towards Optimized MR Thermometry of the Human Heart at 3T
Silke Hey, Alexandru Cernicanu, Baudouin Denis de Senneville, Sébastien Roujol, Mario Ries, Pierre Jais, Chrit Moonen, Bruno Quesson
NMR in Biomedicine, 2012, pp.35-43

Validation of a hybrid Doppler ultrasound vessel-based registration algorithm for neurosurgery.
Sean Jy-Shyang Chen, Ingerid Reinertsen, Pierrick Coupé, Charles X B Yan, Laurence Mercier, D Rolando del Maestro, D Louis Collins
International Journal of Computer Assisted Radiology and Surgery, 2012, 7 (5), pp.667-85. ⟨10.1007/s11548-012-0680-y⟩

Robust real time constrained estimation of respiratory motion interventional MRI on mobile organs
Sébastien Roujol, Jenny Benois-Pineau, Baudouin de Senneville, Mario Ries, Bruno Quesson, Chrit T. W. Moonen
IEEE Transactions on Information Technology in Biomedicine, 2012, 16 (3), pp.365 - 374. ⟨10.1109/TITB.2012.2190366⟩

A CANDLE for a deeper in vivo insight.
Pierrick Coupé, Martin Munz, Jose V Manjón, Edward S Ruthazer, D. Louis Collins
Medical Image Analysis, 2012, 16 (4), pp.849-64. ⟨10.1016/j.media.2012.01.002⟩

Feasibility of fast MR-thermometry during cardiac RF ablation
Baudouin Denis de Senneville, Sébastien Roujol, Pierre Jaïs, Chrit Moonen, Gwenaël Herigault, Bruno Quesson
Nuclear Magnetic Resonance in Biomedicine, 2012, pp.556-562

Robust adaptive extended Kalman filtering for real time MR-thermometry guided HIFU interventions
Sébastien Roujol, Baudouin Denis de Senneville, Silke Hey, Chrit Moonen, Mario Ries
IEEE Transactions on Medical Imaging, 2012, 31 (3), pp.533-542

Simultaneous segmentation and grading of anatomical structures for patient’s classification: application to Alzheimer’s disease.
Pierrick Coupé, Simon F Eskildsen, José V Manjón, Vladimir Fonov, D Louis Collins
NeuroImage, 2012, 59 (4), pp.3736-47. ⟨10.1016/j.neuroimage.2011.10.080⟩

BEaST: brain extraction based on nonlocal segmentation technique.
Simon F. Eskildsen, Pierrick Coupé, Vladimir Fonov, José V. Manjón, Kelvin K. Leung, Nicolas Guizard, Shafik N. Wassef, Lasse Riis Ostergaard, D Louis Collins
NeuroImage, 2012, 59 (3), pp.2362-73. ⟨10.1016/j.neuroimage.2011.09.012⟩

New methods for MRI denoising based on sparseness and self-similarity.
José V. Manjón, Pierrick Coupé, Antonio Buades, D. Louis Collins, Montserrat Robles
Medical Image Analysis, 2012, 16 (1), pp.18-27. ⟨10.1016/j.media.2011.04.003⟩

Robust Adaptive Extended Kalman Filtering for Real Time MR-Thermometry Guided HIFU Interventions
Sébastien Roujol, Baudouin Denis de Senneville, Silke Hey, Chrit Moonen, Mario Ries
IEEE Transactions on Medical Imaging, 2012, 31 (3), pp.533-542. ⟨10.1109/TMI.2011.2171772⟩

Feasibility of fast MR-thermometry during cardiac radiofrequency ablation
Baudouin Denis de Senneville, Sébastien Roujol, Pierre Jaïs, Chrit T. W. Moonen, Gwenaël Herigault, Bruno Quesson
NMR in Biomedicine, 2012, 25 (4), pp.556-562. ⟨10.1002/nbm.1771⟩

Robust Real-Time-Constrained Estimation of Respiratory Motion for Interventional MRI on Mobile Organs
Sébastien Roujol, Jenny Benois-Pineau, Baudouin Denis de Senneville, Mario Ries, Bruno Quesson, Chrit Moonen
IEEE Transactions on Information Technology in Biomedicine, 2012, 16 (3), pp.365-374. ⟨10.1109/TITB.2012.2190366⟩

Multi-atlas labeling with population-specific template and non-local patch-based label fusion
Vladimir Fonov, Pierrick Coupé, Simon F. Eskildsen, Jose V. Manjon, Louis Collins
MICCAI 2012 Workshop on Multi-Atlas Labeling, Oct 2012, Nice, France. pp.63-66

Improving prediction of Alzheimer’s disease using patterns of cortical thinning and homogenizing images according to disease stage
Simon F. Eskildsen, Pierrick Coupé, Daniel García-Lorenzo, Vladimir Fonov, Jens C. Pruessner, Louis Collins
MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer’s Disease and Related Disorders, Oct 2012, Nice, France. pp.79-90

Robust individual template pipeline for longitudinal MR images
Nicolas Guizard, Vladimir Fonov, Bérengère Aubert-Broche, Daniel García-Lorenzo, Pierrick Coupé, Simon Eskildsen, D. Louis Collins
MICCAI 2012 Workshop on Novel Biomarkers for Alzheimer’s Disease and Related Disorders, Oct 2012, France. pp.231

A new framework for analyzing structural volume changes of longitudinal brain MRI data
Bérengère Aubert-Broche, Vladimir Fonov, Daniel García-Lorenzo, Abderazzak Mouiha, Nicolas Guizard, Pierrick Coupé, Simon F. Eskildsen, Louis Collins
Spatio-temporal Image Analysis for Longitudinal and Time-Series Image Data, Oct 2012, Nice, France. pp.50-62

SNIPE: A New Method to Identify Imaging Biomarker for Early Detection of Alzheimer’s Disease
Pierrick Coupé, Simon F. Eskildsen, José V. Manjón, Vladimir Fonov, Jens C. Pruessner, Michèle Allard, Louis Collins
MICCAI 2012 Workshop on Novel Biomarkers for Alzheimer’s Disease and Related Disorders, Oct 2012, Nice, France. pp.41-51

Visualizing stages of cortical atrophy in progressive MCI from the ADNI cohort
Simon F. Eskildsen, Vladimir Fonov, Pierrick Coupé, Louis Collins
Alzheimer’s Association International Conference, Jul 2012, Vancouver, Canada. epub ahead of print

Patch-Based Morphometry: Application to Alzheimer’s Disease
Pierrick Coupé, José V. Manjón, Vladimir Fonov, Simon F. Eskildsen, Louis D. Collins
Alzheimer’s Association International Conference, Jun 2012, Vancouver, Canada. epub ahead of print

Superresolution improves MRI cortical segmentation with FACE
Simon F. Eskildsen, José V. Manjón, Pierrick Coupé, Vladimir Fonov, Louis D. Collins
Organization for Human Brain Mapping, Jun 2012, Beijing, China

Combined Ultrasound Echography and Magnetic Resonance Imaging Guidance for motion compensated HIFU Interventions
Mario Ries, Baudouin Denis de Senneville, Yvan Regard, Chrit Moonen
International symposium on Therapeutic Ultrasound, Jun 2012, France. pp.202-206

Automatic lateral ventricle segmentation in infant population with high risk of autism
Vladimir Fonov, Pierrick Coupé, Martin Styner, Louis D. Collins
Organization for Human Brain Mapping, Jun 2012, Beijing, China

DWI denoising using overcomplete Local PCA Decomposition
José V. Manjón, Pierrick Coupé, Luis Concha, Antoni Buades, Louis Collins, Montserrat Robles
ISMRM 20th Annual Meeting, May 2012, Melbourne, Australia. pp.3580

Robust real-time MR-geometric distortion correction for interventional procedure on mobile targets
Baudouin Denis de Senneville, Mario Ries, Chrit Moonen
IEEE International Symposium on Biomedical Imaging, May 2012, France. pp.964-967

MRI-guided high-intensity focused ultrasound sonication of liver and kidney
Baudouin Denis de Senneville, Mario Ries, Lambertus Bartels, Chrit Moonen
Interventional Magnetic Resonance Imaging, Springer Berlin Heidelberg, pp.349-366, 2012

2011

Adaptive Multiresolution Non-Local Means Filter for 3D MR Image Denoising
Pierrick Coupé, José V. Manjón, Montserrat Robles, Louis D. Collins
IET Image Processing, 2011

3D Rigid Registration of Intraoperative Ultrasound and Preoperative MR Brain Images based on Hyperechogenic Structures
Pierrick Coupé, Pierre Hellier, Xavier Morandi, Christian Barillot
International Journal of Biomedical Imaging, 2011, pp.53131

Appearance-based modeling for segmentation of hippocampus and amygdala using multi-contrast MR imaging.
Shiyan Hu, Pierrick Coupé, Jens C. Pruessner, Louis D. Collins
NeuroImage, 2011, 58 (2), pp.549-59. ⟨10.1016/j.neuroimage.2011.06.054⟩

Automatic Non-Rigid Calibration of Image Registration for Real Time Interventional MRI of mobile organs
Sébastien Roujol, Mario Ries, Chrit T. W. Moonen, Baudouin Denis de Senneville
IEEE Transactions on Medical Imaging, 2011, pp.1737-45

Spectrally selective pencil-beam navigator for motion compensation of MR-guided high-intensity focused ultrasound therapy of abdominal organs
Max Köhler, Baudouin Denis de Senneville, Bruno Quesson, Chrit T. W. Moonen, Mario Ries
Magnetic Resonance in Medicine, 2011, pp.102-111

MR-guided thermotherapy of abdominal organs using a robust PCA-based motion descriptor
Baudouin Denis de Senneville, Mario Ries, G. Maclair, Chrit T. W. Moonen
IEEE Transactions on Medical Imaging, 2011, pp.1987-1995

Non-invasive thermo-therapy of abdominal organs
Baudouin Denis de Senneville, Mario Ries, Bruno Quesson, Hervé Trillaud, Rémi Berriet, Gérard Fleury, Chrit T. W. Moonen
Innovation and Research in BioMedical engineering, 2011, pp.109-112

Non-invasive thermo-therapy of abdominal organs
Baudouin Denis de Senneville, Mario Ries, Bruno Quesson, Hervé Trillaud, Remi Berriet, Gérard Fleury, Chrit Moonen
Innovation and Research in BioMedical engineering, 2011

Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation.
Pierrick Coupé, José V. Manjón, Vladimir Fonov, Jens C. Pruessner, Montserrat Robles, D Louis Collins
NeuroImage, 2011, 54 (2), pp.940-954. ⟨10.1016/j.neuroimage.2010.09.018⟩

Simultaneous segmentation and grading of hippocampus for patient classification with Alzheimer’s disease.
Pierrick Coupé, Simon F Eskildsen, José V Manjón, Vladimir Fonov, D Louis Collins
Medical image computing and computer-assisted intervention : MICCAI .. International Conference on Medical Image Computing and Computer-Assisted Intervention, 2011, 14 (Pt 3), pp.149-57

Spectrally selective pencil-beam navigator for motion compensation of MR-guided high-intensity focused ultrasound therapy of abdominal organs
Max O Köhler, Baudouin Denis de Senneville, Bruno Quesson, Chrit T W Moonen, Mario Ries
Magnetic Resonance in Medicine, 2011, 66 (1), pp.102-111. ⟨10.1002/mrm.22784⟩

MR-Guided Thermotherapy of Abdominal Organs Using a Robust PCA-Based Motion Descriptor
Baudouin Denis de Senneville, Mario Ries, Grégory Maclair, Chrit Moonen
IEEE Transactions on Medical Imaging, 2011, 30 (11), pp.1987-1995. ⟨10.1109/TMI.2011.2161095⟩

Automatic Non-Rigid Calibration of Image Registration for Real Time MR-guided HIFU ablations of mobile organs
Sébastien Roujol, Mario Ries, Chrit Moonen, Baudouin Denis de Senneville
IEEE Transactions on Medical Imaging, 2011, 30 (10), pp.1737-1745. ⟨10.1109/TMI.2011.2144615⟩

Real-time Volumetric MRI Thermometry of Focused Ultrasound Ablation in vivo : A feasibility study in pig liver and kidney
Bruno Quesson, Laurent Christophe, G. Maclair, Baudouin Denis de Senneville, Charles Mougenot, Mario Ries, Thibaut Carteret, A. Rullier, Chrit T. W. Moonen
NMR in Biomedicine, 2011, 24 (2), pp.145-153. ⟨10.1002/nbm.1563⟩

Validation of appearance-model based segmentation with patch-based refinement on medial temporal lobe structures
Shiyan Hu, Pierrick Coupé, Jens C. Pruessner, Louis D. Collins
MICCAI Workshop on Multi-Atlas Labeling and Statistical Fusion, Sep 2011, Toronto, Canada. pp.28-37

BEaST: Brain extraction using multiresolution nonlocal segmentation.
Simon Eskildsen, Pierrick Coupé, Kelvin K. Leung, Vladimir Fonov, Nicolas Guizard, Shafik N. Wassef, Lasse Riis Ostergaard, Louis D. Collins
MICCAI Workshop on Multi-Atlas Labeling and Statistical Fusion, Sep 2011, Toronto, Canada. pp.97-108

Extended Kalman filtering for MR-thermometry guided High Intensity Focused Ultrasound using the bio heat transfer equation
Sébastien Roujol, Baudouin Denis de Senneville, Silke Hey, Chrit T. W. Moonen, Mario Ries
IEEE International Conference on Image Processing, Sep 2011, Belgium

Atrophy specific MRI brain template for Alzheimer’s disease and Mild Cognitive Impairment
Vladimir Fonov, Pierrick Coupé, Simon F. Eskildsen, Louis D. Collins
Alzheimer’s Association International Conference, Jul 2011, France. pp.S58

Influence of the Training Library Composition on a Patch-based label fusion method: Application to Hippocampus Segmentation on ADNI dataset.
Pierrick Coupé, Vladimir Fonov, Simon F. Eskildsen, José V. Manjón, Douglas Arnold, Louis D. Collins
Alzheimer’s Association International Conference, Jul 2011, France. pp.S24

Prediction of MCI converters in the ADNI cohort using patterns of cortical thinning
Simon F. Eskildsen, Vladimir Fonov, Pierrick Coupé, Lasse Riis Ostergaard, Louis D. Collins
Alzheimer’s Association International Conference, Jul 2011, France. pp.S211

Validation of basal ganglia segmentation on a 3T MRI template
Claire Haegelen, Nicolas Guizard, Pierrick Coupé, Florent Lalys, Pierre Jannin, Xavier Morandi, D. Louis Collins
Human Brain Mapping, Jun 2011, Quebec City, Canada

Robust fusion of Jacobian maps for Deformation-Based Morphometry
Nicolas Guizard, Pierrick Coupé, Vladimir Fonov, Douglas Arnold, Louis D. Collins
Organization for Human Brain Mapping 2011 Annual Meeting, Jun 2011, Canada

MRI denoising based on Sparseness and Self-Similarity
José V. Manjón, Pierrick Coupe, Antoni Buades, Louis D. Collins, Montserrat Robles
Organization for Human Brain Mapping 2011 Annual Meeting, Jun 2011, Canada

Effect of non-local means denoising on cortical segmentation accuracy with FACE
Simon F. Eskildsen, Pierrick Coupé, Vladimir Fonov, Lasse Riis Ostergaard, Louis D. Collins
Organization for Human Brain Mapping 2011 Annual Meeting, Jun 2011, Canada

Prediction of Alzheimer’s Disease in Subjects with Mild Cognitive Impairment Using Structural Patterns of Cortical Thinning
Simon F. Eskildsen, Vladimir Fonov, Pierrick Coupé, Lasse Riis Ostergaard, Louis D. Collins
15th Nordic-Baltic Conference on Biomedical Engineering and Medical Physics (NBC 2011), Jun 2011, Denmark. pp.156-159

Super-Resolution For Real-Time Volumetric MR-Temperature Monitoring
Baudouin Denis de Senneville, Silke Hey, Chrit T. W. Moonen, Mario Ries
IEEE International Symposium on Biomedical Imaging, May 2011, United States

Robust Real-Time Motion Estimation For MR-Thermometry
Sébastien Roujol, Mario Ries, Chrit T. W. Moonen, Baudouin Denis de Senneville
IEEE International Symposium on Biomedical Imaging, May 2011, United States

MRI-Guided HIFU : Thermal Mapping and Gene Activation
Chrit Moonen, Baudouin Denis de Senneville, Bruno Quesson, Franck Couillaud
Therapeutic Ultrasound, Nova Science Publishers, 2011

2010

Non-local MRI upsampling.
José V. Manjón, Pierrick Coupé, Antonio Buades, Vladimir Fonov, D. Louis Collins, Montserrat Robles
Medical Image Analysis, 2010, 14 (6), pp.784-92. ⟨10.1016/j.media.2010.05.010⟩

A method for MRI Guidance of Intercostal High Intensity Focused Ultrasound Ablation in the Liver
Bruno Quesson, Mathilde Merle, Max Köhler, Charles Mougenot, Sébastien Roujol, Baudouin Denis de Senneville, Chrit T. W. Moonen
Medical Physics, 2010, pp.2533-40

Real-time MR-Thermometry and Dosimetry for interventional guidance on abdominal organs
Sébastien Roujol, Mario Ries, Bruno Quesson, Chrit Moonen, Baudouin Denis de Senneville
Magnetic Resonance in Medicine, 2010, pp.1080-1087

Rapid motion correction in MR guided High Intensity Focused Ultrasound heating using real-time ultrasound echo information
Philippe Lourenço de Oliveira, Baudouin Denis de Senneville, Iulus Dragonu, Chrit T. W. Moonen
Nuclear Magnetic Resonance in Biomedicine, 2010, pp.1103-1108

Real-Time 3D Target Tracking in MRI guided Focused Ultrasound Ablations in moving Tissues
Mario Ries, Baudouin Denis de Senneville, Sébastien Roujol, Yasmina Berber, Bruno Quesson, Chrit Moonen
Magnetic Resonance in Medicine, 2010, pp.1704-12

Motion Correction in MR Thermometry of Abdominal Organs : A Comparison of the Referenceless vs the Multi-baseline Approach
Baudouin Denis de Senneville, Sébastien Roujol, Chrit T. W. Moonen, Mario Ries
Magnetic Resonance in Medicine, 2010, pp.1373-1381

Robust Rician noise estimation for MR images.
Pierrick Coupé, José V. Manjón, Elias Gedamu, Douglas L. Arnold, Montserrat Robles, D Louis Collins
Medical Image Analysis, 2010, 14 (4), pp.483-93. ⟨10.1016/j.media.2010.03.001⟩

Online real-time reconstruction of adaptive TSENSE with commodity CPU / GPU hardware
Sébastien Roujol, Baudouin Denis de Senneville, Erkki Vahalla, Thomas Sangild Sorensen, Chrit Moonen, Mario Ries
Magnetic Resonance in Medicine, 2010

Real time ultrasound image denoising
Fernanda Palhano Xavier de Fontes, Guillermo Andrade Barroso, Pierrick Coupé, Pierre Hellier
Journal of Real-Time Image Processing, 2010, ⟨10.1007/s11554-010-0158-5⟩

An automatic geometrical and statistical method to detect acoustic shadows in intraoperative ultrasound brain images
Pierre Hellier, Pierrick Coupé, Xavier Morandi, D. Louis Collins
Medical Image Analysis, 2010, 14 (2), pp.195-204. ⟨10.1016/j.media.2009.10.007⟩

Adaptive non-local means denoising of MR images with spatially varying noise levels.
José V. Manjón, Pierrick Coupé, Luis Martí-Bonmatí, D Louis Collins, Montserrat Robles
Journal of Magnetic Resonance Imaging, 2010, 31 (1), pp.192-203. ⟨10.1002/jmri.22003⟩

MRI superresolution using self-similarity and image priors.
José V Manjón, Pierrick Coupé, Antonio Buades, D Louis Collins, Montserrat Robles
International Journal of Biomedical Imaging, 2010, 2010, pp.425891. ⟨10.1155/2010/425891⟩

Rapid motion correction in MR-guided high-intensity focused ultrasound heating using real-time ultrasound echo information
Philippe Lourenço de Oliveira, Baudouin Denis de Senneville, Iulius Dragonu, Chrit T W Moonen
NMR in Biomedicine, 2010, 23 (9), pp.1103-1108. ⟨10.1002/nbm.1526⟩

Real-time MR-thermometry and dosimetry for interventional guidance on abdominal organs
Sébastien Roujol, Mario Ries, Bruno Quesson, Chrit Moonen, Baudouin Denis de Senneville
Magnetic Resonance in Medicine, 2010, 13, pp.3482 - 1087. ⟨10.1002/mrm.22309⟩

Motion correction in MR thermometry of abdominal organs: A comparison of the referenceless vs. the multibaseline approach
Baudouin Denis de Senneville, Sébastien Roujol, Chrit Moonen, Mario Ries
Magnetic Resonance in Medicine, 2010, 64 (5), pp.1373-1381. ⟨10.1002/mrm.22514⟩

A method for MRI guidance of intercostal high intensity focused ultrasound ablation in the liver
Bruno Quesson, Mathilde Merle, Max Köhler, Charles Mougenot, Sebastien Roujol, Baudouin Denis de Senneville, Chrit Moonen
Medical Physics, 2010, 37 (6), pp.2533-2540. ⟨10.1118/1.3413996⟩

Nonlocal Patch-Based Label Fusion for Hippocampus Segmentation
Pierrick Coupé, Jose Vicente Manjon, Vladimir Fonov, Jens C. Pruessner, Montserrat Robles, Louis D. Collins
Medical Image Computing and Computer-Assisted Intervention – MICCAI 2010, Sep 2010, Beijing, China. pp.129-136, ⟨10.1007/978-3-642-15711-0_17⟩

Robust 3D Reconstruction and Mean-Shift Clustering of Motoneurons from Serial Histological Images
Nicolas Guizard, Pierrick Coupé, Nicolas Stifani, Stefano Stifani, D. Louis Collins
Medical Imaging and Augmented Reality (MIAR), Sep 2010, China. pp.191-199, ⟨10.1007/978-3-642-15699-1⟩

Impact of Non-local Means filtering on Brain Tissue Segmentation
Christian Gaser, Pierrick Coupé
Organization for Human Brain Mapping 2010 Annual Meeting, Jun 2010, United States

A novel approach for high-resolution image reconstruction for in-vivo fetal brain MRI
Cedric Clouchoux, Pierrick Coupé, José V. Manjón, Nicolas Guizard, Marine Bouyssi-Kobar, Mylene Lefebvre, Adre Du Plessis, Alan Evans, Catherine Limperopoulos
Organization for Human Brain Mapping 2010 Annual Meeting, Jun 2010, United States

Template Construction using a Patch-based Robust Estimator
Pierrick Coupé, Vladimir Fonov, José V. Manjón, Louis D. Collins
Organization for Human Brain Mapping 2010 Annual Meeting, Jun 2010, Spain

A new criterion for motion estimation assessment for MR-thermometry applications
Sébastien Roujol, Mario Ries, Bruno Quesson, Jenny Benois-Pineau, Chrit Moonen, Baudouin de Senneville
7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010, Apr 2010, Rotterdam, Netherlands. pp.1241-1244, ⟨10.1109/ISBI.2010.5490220⟩

Intraoperative ultrasonography for the correction of brainshift based on the matching of hyperechogenic structures
Pierrick Coupé, Pierre Hellier, Xavier Morandi, Christian Barillot
IEEE International Symposium on Biomedical Imaging, Apr 2010, Rotterdam, Netherlands. pp.1405 - 1408, ⟨10.1109/ISBI.2010.5490261⟩

Adaptive volumetric MR-guided high-intensity focused ultrasound ablations in moving organs
Silke Hey, Baudouin Denis de Senneville, Max Köhler, Bruno Quesson, Chrit T. W. Moonen, Mario Ries
International Symposium of Therapeutic Ultrasound, 2010, Aix en Provence, France

Three dimensional motion compensation for real-time MRI guided focused ultrasound treatment of abdominal organs
Mario Ries, Baudouin Denis de Senneville, Gregory Maclair, Bruno Quesson, Chrit T. W. Moonen
International Symposium of Therapeutic Ultrasound, 2010, Aix en Provence, France. pp.243-246

Real time constrained motion estimation for ECG-gated cardiac MRI
Sébastien Roujol, Jenny Benois-Pineau, Baudouin Denis de Senneville, Bruno Quesson, Mario Ries, Chrit T. W. Moonen
International Conference on Image Processing, 2010, Hong Kong, China

Rapid and volumetric MRI thermometry for monitoring HIFU ablation in the liver during breathing
Bruno Quesson, Laurent Christophe, Gregory Maclair, Baudouin Denis de Senneville, Mario Ries, Chrit T. W. Moonen
International Symposium of Therapeutic Ultrasound, 2010, Aix en Provence, France. pp.239-242

MRI Superresolution Using Self Similarity and Image Priors
Jose Vicente Manjon, Pierrick Coupé, Antoni Buades, D. Louis Collins, Montserrat Robles
2010

2009

Nonlocal means-based speckle filtering for ultrasound images.
Pierrick Coupé, Pierre Hellier, Charles Kervrann, Christian Barillot
IEEE Transactions on Image Processing, 2009, 18 (10), pp.2221-9. ⟨10.1109/TIP.2009.2024064⟩

On-line correction of respiratory-induced field disturbances for continuous MR-thermometry in the breast
Silke Hey, Gregory Maclair, Baudouin Denis de Senneville, Matthieu Lepetit-Coiffé, Yasmina Berber, Bruno Quesson, Chrit T. W. Moonen, Mario Ries
Magnetic Resonance in Medicine, 2009, pp.1494-1499

Online real-time reconstruction of adaptive TSENSE with commodity CPU / GPU hardware
Sébastien Roujol, Baudouin Denis de Senneville, Erki Vahalla, Thomas Sangild Sorensen, Chrit T. W. Moonen, Mario Ries
Magnetic Resonance in Medicine, 2009, pp.1658-1664

Molecular MR imaging and MR-guided ultrasound therapies in cancer
Nicolas Grenier, Bruno Quesson, Baudouin Denis de Senneville, Hervé Trillaud, Franck Couillaud, Chrit T. W. Moonen
Acta medica belgica, 2009, 92 (1), pp.8-12

Real-time geometric distortion correction for interventional imaging with echo-planar imaging (EPI)
Iulius Dragonu, Baudouin Denis de Senneville, Bruno Quesson, Chrit Moonen, Mario Ries
Magnetic Resonance in Medicine, 2009, 61 (4), pp.994-1000. ⟨10.1002/mrm.21903⟩

An object-based method for Rician noise estimation in MR images.
Pierrick Coupé, Jose Vicente Manjon, Elias Gedamu, Douglas L. Arnold, Montserrat Robles, Louis D. Collins
Medical image computing and computer-assisted intervention : MICCAI .. International Conference on Medical Image Computing and Computer-Assisted Intervention, 2009, 12 (Pt 2), pp.601-8. ⟨10.1007/978-3-642-04271-3_73⟩

Object-based Rician Noise Estimation for MR Images
Pierrick Coupé, José V. Manjón, Elias Gedamu, Douglas Arnold, Montserrat Robles, Louis D. Collins
Organization for Human Brain Mapping 2009 Annual Meeting, Jul 2009, United States. pp.s81, ⟨10.1016/S1053-8119(09)70571-3⟩

Adaptive Multiresolution Denoising Filter for 3D MR Images
Pierrick Coupé, José V. Manjón, Montserrat Robles, Louis D. Collins
Organization for Human Brain Mapping 2009 Annual Meeting, Jun 2009, United States. pp.S50, ⟨10.1016/S1053-8119(09)70119-3⟩

Spatially Adaptive Non-local MRI Denoising
José V. Manjón, Pierrick Coupé, Luis Martí-Bonmatí, Louis D. Collins, Montserrat Robles
Organization for Human Brain Mapping 2009 Annual Meeting, Jun 2009, United States. pp.S72, ⟨10.1016/S1053-8119(09)70443-4⟩

2008

Real time monitoring of radiofrequency ablation based on MR thermometry and thermal dose in the pig liver in vivo
Olivier Seror, Matthieu Lepetit-Coiffé, B. Le Bail, Baudouin Denis de Senneville, Hervé Trillaud, Chrit T. W. Moonen, Bruno Quesson
European Radiology, 2008, 18 (2), pp.408-16. ⟨10.1007/s00330-007-0761-4⟩

Improvement of MRI-Functional measurement with automatic movement correction in native and transplanted kidneys
Baudouin Denis de Senneville, Iosif Mendichovszky, Sébastien Roujol, Isky Gordon, Chrit T. W. Moonen, Nicolas Grenier
Journal of Magnetic Resonance Imaging, 2008, pp.970-978

Acceleration and validation of optical flow based deformable registration for image-guided radiotherapy
Karsten Noe, Baudouin Denis de Senneville, U.V. Elstrom, K. Tanderup, Thomas Sangild Sorensen
Acta Oncologica, 2008, pp.1286-1293

Real-time Geometric Distortion Correction for Interventional Imaging with EPI
Iulus Dragonu, Baudouin Denis de Senneville, Bruno Quesson, Chrit T. W. Moonen, Mario Ries
Magnetic Resonance in Medicine, 2008, pp.994-1000

Three dimensional spatial and temporal temperature control with MR- thermometry guided Focused Ultrasound
Charles Mougenot, Bruno Quesson, Baudouin Denis de Senneville, Philippe Lourenço de Oliveira, Sarah Sprinkhuizen, J. Palussiere, Nicolas Grenier, Chrit T. W. Moonen
Magnetic Resonance in Medicine, 2008, pp.603-14

An optimized blockwise nonlocal means denoising filter for 3-D magnetic resonance images.
Pierrick Coupé, Pierre Yger, Sylvain Prima, Pierre Hellier, Charles Kervrann, Christian Barillot
IEEE Transactions on Medical Imaging, 2008, 27 (4), pp.425-41. ⟨10.1109/TMI.2007.906087⟩

Measurement of glomerular filtration rate with magnetic resonance imaging: principles, limitations, and expectations
Nicolas Grenier, Iosif Mendichovszky, Baudouin Denis de Senneville, Sébastien Roujol, Pascal Desbarats, Michael Pedersen, Kevin Wells, Jorgen Frokiaer, Isky Gordon
Seminars in Nuclear Medicine, 2008, 38 (1), pp.47-55

Improvement of MRI-functional measurement with automatic movement correction in native and transplanted kidneys
Baudouin Denis de Senneville, Iosif Alexandru Mendichovszky, Sébastien Roujol, Isky Gordon, Chrit Moonen, Nicolas Grenier
Journal of Magnetic Resonance Imaging, 2008, 28 (4), pp.970-978. ⟨10.1002/jmri.21515⟩

3D Wavelet Sub-Bands Mixing for Image Denoising
Pierrick Coupé, Pierre Hellier, Sylvain Prima, Charles Kervrann, Christian Barillot
International Journal of Biomedical Imaging, 2008, 2008 (Article ID 590183), pp.590183. ⟨10.1155/2008/590183⟩

Measurement of Glomerular Filtration Rate With Magnetic Resonance Imaging: Principles, Limitations, and Expectations
Nicolas Grenier, Iosif Mendichovszky, Baudouin Denis de Senneville, Sébastien Roujol, Pascal Desbarat, Michael Pedersen, Kevin Wells, Jorgen Frokiaer, Isky Gordon
Seminars in Nuclear Medicine, 2008, 38 (1), pp.47-55. ⟨10.1053/j.semnuclmed.2007.09.004⟩

Acceleration and validation of optical flow based deformable registration for image-guided radiotherapy
Karsten Østergaard Noe, Baudouin Denis de Senneville, Vindelev Ulrik, Kari Tanderup, Thomas Sangild Sørensen
Acta Oncologica, 2008, 47 (7), pp.1286-1293. ⟨10.1080/02841860802258760⟩

Rician noise removal by non-Local Means filtering for low signal-to-noise ratio MRI: applications to DT-MRI.
Nicolas Wiest-Daesslé, Sylvain Prima, Pierrick Coupé, Sean Patrick Morrissey, Christian Barillot
11th International Conference on Medical Image Computing and Computer-Assisted Intervention, Sep 2008, New York, United States. pp.171-9, ⟨10.1007/978-3-540-85990-1_21⟩

Acoustic shadows detection, application to accurate reconstruction of 3D intraoperative ultrasound
Pierre Hellier, Pierrick Coupé, Pierre Meyer, Xavier Morandi, D. Louis Collins
IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 2008, Paris, France

Bayesian Non Local Means-Based Speckle filtering
Pierrick Coupé, Pierre Hellier, Charles Kervrann, Christian Barillot
IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 2008, Paris, France

An optimised multi-baseline approach for on-line MR-temperature monitoring on commodity graphics hardware
Baudouin Denis de Senneville, Karsten Noe, Mario Ries, Michael Pedersen, Chrit T. W. Moonen, Thomas Sangild Sorensen
International Symposium on Biomedical Imaging, 2008, Paris, France

Brain shift compensation in image-guided neurosurgery based on 3-D ultrasound
Pierrick Coupé
Signal and Image processing. Université Rennes 1, 2008. English. ⟨NNT : ⟩

2007

MR-thermometry for monitoring tumor ablation
Baudouin Denis de Senneville, Charles Mougenot, Bruno Quesson, Iulus Dragonu, Nicolas Grenier, Chrit T. W. Moonen
European Radiology, 2007, pp.2401-2410

Therapies by focus ultrasound
Nicolas Grenier, Hervé Trillaud, J. Palussiere, Charles Mougenot, Bruno Quesson, Baudouin Denis de Senneville, Chrit T. W. Moonen
Journal de Radiologie, 2007, pp.1787-1800

Simulation of biphasic CT findings in hepatic cellular carcinoma by a two-level physiological model.
Marek Kretowski, Johanne Bezy-Wendling, Pierrick Coupé
IEEE Transactions on Biomedical Engineering, 2007, 54 (3), pp.538-42. ⟨10.1109/TBME.2006.888834⟩

MR-thermometry for monitoring tumor ablation
Baudouin Denis de Senneville, Charles Mougenot, Bruno Quesson, Dragonu Iulius, Nicolas Grenier, Chrit T. W. Moonen
European Radiology, 2007, 17 (9), pp.2401-2410. ⟨10.1007/s00330-007-0646-6⟩

Probe Trajectory Interpolation for 3D Reconstruction of Freehand Ultrasound
Pierrick Coupé, Pierre Hellier, Xavier Morandi, Christian Barillot
Medical Image Analysis, 2007

Real-time adaptive methods for treatment of mobile organs by MRI-controlled high-intensity focused ultrasound
Baudouin Denis de Senneville, Charles Mougenot, Chrit Moonen
Magnetic Resonance in Medicine, 2007, 57 (2), pp.319-330. ⟨10.1002/mrm.21124⟩

Non-local means variants for denoising of diffusion-weighted and diffusion tensor MRI.
Nicolas Wiest-Daesslé, Sylvain Prima, Pierrick Coupé, Sean Patrick Morrissey, Christian Barillot
10th International Conference on Medical Image Computing and Computer-Assisted Intervention, Oct 2007, Brisbane, Australia. pp.344-51, ⟨10.1007/978-3-540-75759-7_42⟩

PCA-Based Image Registration : Application to On-Line MR Temperature Monitoring of Moving Tissues
Gregory Maclair, Baudouin Denis de Senneville, Michal Ries, Pascal Desbarats, Jenny Benois-Pineau, Chrit T. W. Moonen
2007 IEEE International Conference on Image Processing, Sep 2007, San Antonio, TX, United States. pp.III-141-III-144, ⟨10.1109/ICIP.2007.4379266⟩

Bayesian non-local means filter, image redundancy and adaptive dictionaries for noise removal
Charles Kervrann, Jérôme Boulanger, Pierrick Coupé
SSVM’07 Proceedings of the 1st international conference on Scale space and variational methods in computer vision, May 2007, Ischia, Italy. pp.520-532

Image Guidance in neurosurgical procedures, the “VISAGES” point of view
Christian Barillot, Pierrick Coupé, Bernard Gibaud, Pierre Hellier, Pierre Jannin, Xavier Morandi, Perrine Paul, Sylvain Prima, Nicolas Wiest-Daesslé, Omar El Ganaoui
4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Apr 2007, Arlington, United States. pp.1056-1059, ⟨10.1109/ISBI.2007.357037⟩

A PROBABILISTIC OBJECTIVE FUNCTION FOR 3D RIGID REGISTRATION OF INTRAOPERATIVE US AND PREOPERATIVE MR BRAIN IMAGES
Pierrick Coupé, Pierre Hellier, Xavier Morandi, Christian Barillot
IEEE International Symposium on Biomedical Imaging: From Nano to Macro, IEEE Signal Processing Society (SPS) and the IEEE Engineering in Medicine and Biology Society (EMBS), Apr 2007, Washington DC, USA, United States. pp.1320-1323, ⟨10.1109/ISBI.2007.357103⟩

PCA-BASED IMAGE REGISTRATION : APPLICATION TO ON-LINE MR TEMPERATURE OF MOVING TISSUES
G. Maclair, Baudouin Denis de Senneville, Mario Ries, B. Quesson, Pascal Desbarats, Jenny Benois-Pineau, C.T.W. Moonen
IEEE International Conference on Image Processing (ICIP), 2007, San Antonio, United States. pp.III - 141-III

PCA-based magnetic field modeling: application for on-line MR temperature monitoring
G. Maclair, Baudouin Denis de Senneville, Mario Ries, Bruno Quesson, Pascal Desbarats, Jenny Benois-Pineau, Chrit Moonen
Medical Image Computing and Computer-Assisted Intervention, 2007, Brisbane, Australia. pp.411-129

ROBUST SPATIAL PHASE UNWRAPPING FOR ON-LINE MR-TEMPERATURE MONITORING
Baudouin Denis de Senneville, G. Maclair, Mario Ries, P. Desbarats, B. Quesson, C.T.W. Moonen
Proceedings of IEEE ICIP Conference 2007, San Antonio, 2007, United States. pp.III - 137-III

2006

Real time adaptive methods for treatment of mobile organs by MRI controlled High Intensity Focused Ultrasound
Baudouin Denis de Senneville, C. Mougenot, C.T.W. Moonen
Magnetic Resonance in Medicine, 2006, pp.319-30

Fast Non Local Means Denoising for 3D MR Images
Pierrick Coupé, Pierre Yger, Christian Barillot
9th International Conference on Medical Image Computing and Computer-Assisted Intervention, Oct 2006, Copenhagen, Denmark, pp.33-40, ⟨10.1007/11866763_5⟩

Automatic Kidney Tracking for MR Glomerular Filtation Analysis
Baudouin Denis de Senneville, P. Desbarats, Mario Ries, C.T.W. Moonen, N. Grenier
European Society of Urogenital Radiology, Sep 2006, United Kingdom. pp.2837-2840

On-Line Mobile Organ Tracking For Non-Invasive Local Hyperthermia
Baudouin Denis de Senneville, C. Mougenot, P. Desbarats, C.T.W. Moonen
IEEE ICIP06, 2006, United States. pp.2845–2848

Automatic region tracking for motion correction in MR perfusion imaging of the kidney
Baudouin Denis de Senneville, N. Grenier, Mario Ries, P. Desbarats, C.T.W. Moonen
ISMRM, 2006, United States. pp.00

A method for large vessels/brain activity colocalization
Cédric Aguerre, P. Desbarats, Baudouin Denis de Senneville, C.T.W. Moonen
IEEE ICIP06, 2006, United States. pp.2849–2852

Automatic Region Tracking For MR Glomerular Filtration Rate Analysis
Baudouin Denis de Senneville, Mario Ries, P. Desbarats, C.T.W. Moonen, N. Grenier
IEEE ICIP06, 2006, United States. pp.2837–2840

Image processing for on-line reduction of thermometry artifacts
Baudouin Denis de Senneville, B. Quesson, P. Desbarats, C. Mougenot, C.T.W. Moonen
ISMRM, 2006, United States. pp.319 - 330

2005

Magnetic Resonance Temperature imaging
Baudouin Denis de Senneville, B. Quesson, C.T.W. Moonen
International Journal of Hyperthermia, 2005, 21, pp.515–531

Magnetic Resonance Temperature Imaging
Baudouin Denis de Senneville, Bruno Quesson, Chrit T. W. Moonen
International Journal of Hyperthermia, 2005, 21 (6), pp.515-531. ⟨10.1080/02656730500133785⟩

3D Freehand Ultrasound Reconstruction based on Probe Trajectory
Pierrick Coupé, Pierre Hellier, Noura Azzabou, Christian Barillot
8th International Conference on Medical Image Computing and Computer-Assisted Intervention, Sep 2005, Palm Springs, USA, pp.597-604, ⟨10.1007/11566465_74⟩

3D Motion Estimation For On-Line MR Temperature Mapping
Baudouin Denis de Senneville, B. Quesson, P. Desbarats, C.T.W. Moonen
IEEE ICIP 2005, Genova, 2005, Italy. pp.III - 101-4

Faisabilité et précision in vivo du monitorage IRM temps réel à 1,5T par carte de dose thermique des thermo-ablations RF hépatique: corrélation anatomopathologique sur foie de porc
M. Lepetit-Coiffé, O. Séror, Baudouin Denis de Senneville, B. Lebail, C.T.W. Moonen, H. Trillaud, B. Quesson
Société Française de Radiologie, 2005, France

Dynamic cardiac MR temperature imaging with the Proton Resonance Frequency technique: a study on the feasibility and accuracy
B. Quesson, Baudouin Denis de Senneville, G. Hérigault, Pierre Jaïs, C.T.W. Moonen
ISMRM, 2005, United States. pp.408-416

Feasibility and Accuracy of Real Time Monitoring with Motion Corrected Quantitative MR Thermal Dose Mapping for In Vivo Radiofrequency Ablation in Pig Liver
M. Lepetit-Coiffé, O. Séror, Baudouin Denis de Senneville, B. Lebail, C.T.W. Moonen, H. Trillaud, B. Quesson
ESGAR, 2005, Italy

HIFU treatement of mobile organs under MR control
Baudouin Denis de Senneville, C. Mougenot, C.T.W. Moonen
ISTU, 5th annual meeting, 2005, United States

2004

Stability of real-time MR temperature mapping in healthy and diseased human liver
C. Weidensteiner, N. Kerioui, B. Quesson, Baudouin Denis de Senneville, H. Trillaud, C.T.W. Moonen
Journal of Magnetic Resonance Imaging, 2004, 19, pp.438–446

Stability of real-time MR temperature mapping in healthy and diseased human liver
Claudia Weidensteiner, Noureddine Kerioui, Bruno Quesson, Baudouin Denis de Senneville, Hervé Trillaud, Chrit Moonen
Journal of Magnetic Resonance Imaging, 2004, 19 (4), pp.438-446. ⟨10.1002/jmri.20019⟩

Accurate temperature mapping in breast tumours using fast, PRF-based, gated MR thermometry
R. Salomir, J. Palussiiere, G. Herigault, Baudouin Denis de Senneville, N. Grenier, C.T.W. Moonen
ESMRMB 21st annual meeting, Sep 2004, Denmark

High frequency ultrasound characterization of the coagulation process of whole blood
Frédéric Ossant, R. Libgot, Pierrick Coupé, P. Lermusiaux, Frédéric Patat
IEEE Ultrasonics Symposium, Aug 2004, Montréal, Canada. pp.846-849, ⟨10.1109/ULTSYM.2004.1417869⟩

Modeling of tumor conspicuity in hepatic CT images: combined compartment and vascular models
Johanne Bézy-Wendling, Marek Kretowski, Pierrick Coupé
Biomedical Imaging: Nano to Macro, 2004. IEEE International Symposium on, Apr 2004, United States. pp.444-447, ⟨10.1109/ISBI.2004.1398570⟩

Atlas-Based Motion Correction For On-Line MR Temperature Mapping
Baudouin Denis de Senneville, B. Quesson, P. Desbarats, R. Salomir, J. Palussière, C.T.W. Moonen
Proceedings of IEEE ICIP 2004, Singapore, 2004, China. pp.2571–2574

Correction of Accidental Patient Motion For On-line MR Thermometry
Baudouin Denis de Senneville, P. Desbarats, R. Salomir, B. Quesson, C.T.W. Moonen
Proceedings of MICCAI 2004, Saint-Malo, 2004, France. pp.637–644

2003

A fast calculation method for magnetic field inhomogeneity due to an arbitrary distribution of bulk susceptibility
R. Salomir, Baudouin Denis de Senneville, C.T.W. Moonen
Concepts in Magnetic Resonance Part B Magnetic Resonance Engineering, 2003, 19B, pp.26–34

Real-Time Artefact Corrections For Quantitative MR Temperature Mapping
Baudouin Denis de Senneville, P. Desbarats, B. Quesson, C.T.W. Moonen
Journal of WSCG, 2003, Czech Republic. pp.87–94

2002

On-line high order correction of PRF thermometry for the magnetic perturbation due to the movement of a FUS transducer (V - 16)
R. Salomir, Baudouin Denis de Senneville, C. Mougenot, C.T.W. Moonen
4th Interventional MRI Symposium, Sep 2002, Germany. pp.V - 16